myRT

myRT report for GCA_900607925.1_kpneu025

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Seq: UWWS01000002.1 (152101 bp)
Overview 1 RT 1: 141728-144976 bp Neighborhood of RT #1 [141728, 144990] RVT-GII PRK10276 Feature: gene Location: 141728-141949 bp Feature: gene Location: 142211-142441 bp Feature: gene Location: 142675-144162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143080-143770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 43080-1 43770 bp Feature: gene Location: 144168-144335 bp Feature: gene Location: 144565-144990 bp Feature: domain Description: PRK10276 Location: 144568-144976 bp Feature: domain Description: PRK1 0276 Location: 1 44568-1 44976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UWWS01000001.1 (5386084 bp)
Overview 1 RT 1: 1800495-1806966 bp 2 RT 2: 3044286-3049427 bp 3 RT 3: 3224642-3228495 bp 4 RT 4: 3568768-3571673 bp 5 RT 5: 4010240-4013709 bp Neighborhood of RT #1 [1800495, 1806980] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3044286, 3049435] umuC PRK10276 RVT-GII RVT-GII PinE Neighborhood of RT #3 [3224642, 3228495] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3568768, 3571723] RVT-GII int Neighborhood of RT #5 [4010240, 4013765] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1800495-1801919 bp Feature: domain Description: SbcB Location: 1800501-1801917 bp Feature: domain Description: SbcB Location: 1800501-1801917 bp Feature: gene Location: 1802094-1803263 bp Feature: domain Description: dacD Location: 1802103-1803258 bp Feature: domain Description: dacD Location: 1802 103-18032 58 bp Feature: gene Location: 1803781-1805268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804186-1804876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804186-1804876 bp Feature: gene Location: 1805350-1805823 bp Feature: domain Description: PRK10016 Location: 1805353-1805812 bp Feature: domain Description: PRK10016 Location: 1805353-1805812 bp Feature: gene Location: 1805907-1806980 bp Feature: domain Description: YccC Location: 1805928-1806966 bp Feature: domain Description: YccC Location: 180592 8-1806966 bp Feature: gene Location: 3044286-3045551 bp Feature: domain Description: umuC Location: 3044289-3045549 bp Feature: domain Description: umuC Location: 30442 89-3045549 bp Feature: gene Location: 3045553-3045972 bp Feature: domain Description: PRK10276 Location: 3045556-3045967 bp Feature: domain Description: PRK102 76 Location: 3045556-3045967 bp Feature: gene Location: 3046052-3046657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3046055-3046265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3046055-30462 65 bp Feature: gene Location: 3046657-3047232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3046756-3047125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3046756-304712 5 bp Feature: gene Location: 3047271-3047531 bp Feature: gene Location: 3048926-3049435 bp Feature: domain Description: PinE Location: 3048974-3049427 bp Feature: domain Description: PinE Location: 3048974-304942 7 bp Feature: gene Location: 3224642-3225907 bp Feature: domain Description: umuC Location: 3224645-3225905 bp Feature: domain Description: umuC Location: 32 2 4645-32 2 5905 bp Feature: gene Location: 3225910-3226329 bp Feature: domain Description: PRK10276 Location: 3225913-3226324 bp Feature: domain Description: PRK102 76 Location: 32 2 5913-32 2 632 4 bp Feature: gene Location: 3226408-3227892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3226810-3227500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 6810-32 2 7500 bp Feature: gene Location: 3227901-3228068 bp Feature: gene Location: 3228349-3228495 bp Feature: gene Location: 3568768-3570252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3569170-3569860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3569170-3569860 bp Feature: gene Location: 3570261-3570428 bp Feature: gene Location: 3570671-3571723 bp Feature: domain Description: int Location: 3570674-3571673 bp Feature: domain Description: int Location: 3570674-3571673 bp Feature: gene Location: 4010240-4010557 bp Feature: domain Description: PRK10276 Location: 4010246-4010360 bp Feature: domain Description: PRK102 76 Location: 40102 46-4010360 bp Feature: domain Description: PRK10276 Location: 4010387-4010456 bp Feature: domain Description: PRK102 76 Location: 4010387-4010456 bp Feature: gene Location: 4010605-4010784 bp Feature: gene Location: 4010891-4012375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4011293-4011983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40112 93-4011983 bp Feature: gene Location: 4012384-4012551 bp Feature: gene Location: 4013034-4013765 bp Feature: domain Description: Laminin_G_3 Location: 4013355-4013709 bp Feature: domain Description: Laminin_G_3 Location: 4013355-4013709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), int (PHA02601), Laminin_G_3 (pfam13385)