myRT

myRT report for GCA_900608005.1_kpneu030

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Seq: UWXA01000001.1 (5508732 bp)
Overview 1 RT 1: 1283711-1288592 bp 2 RT 2: 4472123-4478521 bp 3 RT 3: 4916461-4919710 bp 4 RT 4: 5261654-5265762 bp 5 RT 5: 5440250-5446127 bp Neighborhood of RT #1 [1283711, 1288597] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [4472123, 4478622] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #3 [4916461, 4920102] YbjK int RVT-GII Neighborhood of RT #4 [5261654, 5265764] DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [5440250, 5446129] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 1283711-1284769 bp Feature: domain Description: YccC Location: 1283717-1284755 bp Feature: domain Description: YccC Location: 1 28371 7-1 284755 bp Feature: gene Location: 1284868-1285341 bp Feature: domain Description: PRK10016 Location: 1284871-1285330 bp Feature: domain Description: PRK1 001 6 Location: 1 284871 -1 285330 bp Feature: gene Location: 1285423-1286907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285825-1286515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 285825-1 28651 5 bp Feature: gene Location: 1286916-1287083 bp Feature: gene Location: 1287428-1288597 bp Feature: domain Description: dacD Location: 1287437-1288592 bp Feature: domain Description: dacD Location: 1 287437-1 288592 bp Feature: gene Location: 4472123-4475110 bp Feature: gene Location: 4475114-4475845 bp Feature: domain Description: Laminin_G_3 Location: 4475435-4475789 bp Feature: domain Description: Laminin_G_3 Location: 4475435-4475789 bp Feature: gene Location: 4476501-4477988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4476906-4477596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4476906-4477596 bp Feature: gene Location: 4478078-4478257 bp Feature: gene Location: 4478305-4478622 bp Feature: domain Description: PRK10276 Location: 4478311-4478425 bp Feature: domain Description: PRK1 0276 Location: 447831 1 -4478425 bp Feature: domain Description: PRK10276 Location: 4478452-4478521 bp Feature: domain Description: PRK1 0276 Location: 4478452-4478521 bp Feature: gene Location: 4916461-4917024 bp Feature: domain Description: YbjK Location: 4916467-4917004 bp Feature: domain Description: YbjK Location: 491 6467-491 7004 bp Feature: gene Location: 4917147-4918199 bp Feature: domain Description: int Location: 4917150-4918149 bp Feature: domain Description: int Location: 491 71 50-491 81 49 bp Feature: gene Location: 4918615-4920102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4919020-4919710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 9020-491 971 0 bp Feature: gene Location: 5261654-5261896 bp Feature: domain Description: DinI Location: 5261705-5261885 bp Feature: domain Description: DinI Location: 5261 705-5261 885 bp Feature: gene Location: 5261911-5262057 bp Feature: gene Location: 5262511-5263998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5262916-5263606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526291 6-5263606 bp Feature: gene Location: 5264077-5264496 bp Feature: domain Description: PRK10276 Location: 5264080-5264491 bp Feature: domain Description: PRK1 0276 Location: 5264080-5264491 bp Feature: gene Location: 5264499-5265764 bp Feature: domain Description: umuC Location: 5264502-5265762 bp Feature: domain Description: umuC Location: 5264502-5265762 bp Feature: gene Location: 5440250-5440966 bp Feature: domain Description: Rve Location: 5440265-5440910 bp Feature: domain Description: Rve Location: 5440265-544091 0 bp Feature: gene Location: 5440972-5441481 bp Feature: domain Description: PinE Location: 5441020-5441473 bp Feature: domain Description: PinE Location: 5441 020-5441 473 bp Feature: gene Location: 5442876-5444363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443281-5443971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443281 -5443971 bp Feature: gene Location: 5444443-5444862 bp Feature: domain Description: PRK10276 Location: 5444446-5444857 bp Feature: domain Description: PRK1 0276 Location: 5444446-5444857 bp Feature: gene Location: 5444864-5446129 bp Feature: domain Description: umuC Location: 5444867-5446127 bp Feature: domain Description: umuC Location: 5444867-54461 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), Laminin_G_3 (pfam13385), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: UWXA01000002.1 (228280 bp)
Overview 1 RT 1: 89244-92002 bp Neighborhood of RT #1 [89244, 92002] PRK10276 RVT-GII RVT-GII Feature: gene Location: 89244-89669 bp Feature: domain Description: PRK10276 Location: 89247-89655 bp Feature: domain Description: PRK102 76 Location: 892 47-89655 bp Feature: gene Location: 89685-90317 bp Feature: gene Location: 90364-90936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90466-90850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90466-90850 bp Feature: gene Location: 90936-91187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90939-91149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90939-91149 bp Feature: gene Location: 91211-91417 bp Feature: gene Location: 91454-92002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII