myRT

myRT report for GCA_900608075.1_kpneu032

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Seq: UWXE01000003.1 (35457 bp)
Overview 1 RT 1: 13053-17489 bp Neighborhood of RT #1 [13053, 17497] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 13053-13430 bp Ori: VCZ15607.1 Feature: domain Description: DDE_Tnp_IS1 Location: 13056-13428 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 3056-1 3428 bp Feature: gene Location: 13475-13750 bp Ori: VCZ15609.1 Feature: domain Description: InsA Location: 13481-13742 bp Feature: domain Description: InsA Location: 1 3481 -1 3742 bp Feature: gene Location: 13902-15389 bp Ori: VCZ15612.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14307-14997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4307-1 4997 bp Feature: gene Location: 15795-16226 bp Ori: VCZ15614.1 Gene: lexA_6 Feature: domain Description: PRK10276 Location: 15846-16209 bp Feature: domain Description: PRK1 0276 Location: 1 5846-1 6209 bp Feature: gene Location: 16226-17497 bp Ori: VCZ15616.1 Gene: dinB1_5 Feature: domain Description: umuC Location: 16229-17489 bp Feature: domain Description: umuC Location: 1 6229-1 7489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UWXE01000001.1 (5322084 bp)
Overview 1 RT 1: 2210221-2213281 bp 2 RT 2: 4550042-4555339 bp Neighborhood of RT #1 [2210221, 2213281] DinI RVT-Retrons Neighborhood of RT #2 [4550042, 4555344] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 2210221-2210661 bp Ori: VCY67056.1 Gene: dinI_1 Feature: domain Description: DinI Location: 2210476-2210659 bp Feature: domain Description: DinI Location: 2 2 10476-2 2 10659 bp Feature: gene Location: 2211090-2211245 bp Feature: gene Location: 2211568-2212518 bp Ori: VCY67063.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2211748-2212291 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 11748-2 2 12 2 91 bp Feature: gene Location: 2212588-2212947 bp Feature: gene Location: 2213087-2213281 bp Feature: gene Location: 4550042-4551007 bp Ori: VCY73688.1 Gene: sapB Feature: domain Description: PRK15110 Location: 4550045-4551005 bp Feature: domain Description: PRK15110 Location: 4550045-4551005 bp Feature: gene Location: 4551208-4551876 bp Ori: VCY73692.1 Gene: yedK_2 Feature: domain Description: PRK09951 Location: 4551211-4551874 bp Feature: domain Description: PRK09951 Location: 45512 11-4551874 bp Feature: gene Location: 4552077-4552985 bp Ori: VCY73694.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4552350-4552806 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4552 350-4552 806 bp Feature: gene Location: 4553658-4554923 bp Ori: VCY73697.1 Gene: dinB1_1 Feature: domain Description: umuC Location: 4553661-4554921 bp Feature: domain Description: umuC Location: 4553661-455492 1 bp Feature: gene Location: 4554925-4555344 bp Ori: VCY73700.1 Gene: lexA_2 Feature: domain Description: PRK10276 Location: 4554928-4555339 bp Feature: domain Description: PRK102 76 Location: 455492 8-4555339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UWXE01000002.1 (108752 bp)
Overview 1 RT 1: 49636-54072 bp Neighborhood of RT #1 [49636, 54080] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 49636-50013 bp Ori: VCZ15386.1 Feature: domain Description: DDE_Tnp_IS1 Location: 49639-50011 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4963 9-50011 bp Feature: gene Location: 50058-50333 bp Ori: VCZ15388.1 Feature: domain Description: InsA Location: 50064-50325 bp Feature: domain Description: InsA Location: 50064-503 25 bp Feature: gene Location: 50485-51972 bp Ori: VCZ15390.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50890-51580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50890-51580 bp Feature: gene Location: 52378-52809 bp Ori: VCZ15392.1 Gene: lexA_4 Feature: domain Description: PRK10276 Location: 52429-52792 bp Feature: domain Description: PRK10276 Location: 52429-52792 bp Feature: gene Location: 52809-54080 bp Ori: VCZ15394.1 Gene: dinB1_3 Feature: domain Description: umuC Location: 52812-54072 bp Feature: domain Description: umuC Location: 52812-54072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)