myRT

myRT report for GCA_900608085.1_ecoli021

Download annotations/find similar RTs

Seq: UWXH01000001.1 (4797914 bp)
Overview 1 RT 1: 1901688-1907985 bp 2 RT 2: 3763460-3768437 bp Neighborhood of RT #1 [1901688, 1908047] PRK11233 cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 IstB_IS21_ATP IstB_IS21 Neighborhood of RT #2 [3763460, 3768472] TnpB_IS66 PHA02517 RVT-GII GIIM zinc_ribbon_11 zinc_ribbon_11 Feature: gene Location: 1901688-1902605 bp Ori: VCY78249.1 Gene: gltC_4 Feature: domain Description: PRK11233 Location: 1901691-1902603 bp Feature: domain Description: PRK1 1 233 Location: 1 901 691 -1 902603 bp Feature: gene Location: 1902707-1903657 bp Ori: VCY78250.1 Gene: cbl Feature: domain Description: cbl Location: 1902710-1903655 bp Feature: domain Description: cbl Location: 1 90271 0-1 903655 bp Feature: gene Location: 1904385-1905941 bp Ori: VCY78251.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1904736-1905171 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 904736-1 9051 71 bp Feature: gene Location: 1906249-1906956 bp Ori: VCY78252.1 Feature: domain Description: Phage_int_SAM_2 Location: 1906255-1906345 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 906255-1 906345 bp Feature: domain Description: Integrase_1 Location: 1906378-1906822 bp Feature: domain Description: Integrase_1 Location: 1 906378-1 906822 bp Feature: gene Location: 1907301-1908047 bp Ori: VCY78253.1 Feature: domain Description: IstB_IS21_ATP Location: 1907370-1907454 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 907370-1 907454 bp Feature: domain Description: IstB_IS21 Location: 1907457-1907985 bp Feature: domain Description: IstB_IS21 Location: 1 907457-1 907985 bp Feature: gene Location: 3763460-3763750 bp Ori: VCY79998.1 Feature: domain Description: TnpB_IS66 Location: 3763472-3763721 bp Feature: domain Description: TnpB_IS66 Location: 3763472-3763721 bp Feature: gene Location: 3763747-3764187 bp Ori: VCY79999.1 Feature: domain Description: PHA02517 Location: 3763750-3764158 bp Feature: domain Description: PHA0251 7 Location: 3763750-37641 58 bp Feature: gene Location: 3764316-3765839 bp Ori: VCY80000.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3764589-3765321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3764589-3765321 bp Feature: domain Description: GIIM Note: maturase Location: 3765396-3765594 bp Feature: domain Description: GIIM Note: maturase Location: 3765396-3765594 bp Feature: gene Location: 3767649-3768083 bp Ori: VCY80001.1 Feature: domain Description: zinc_ribbon_11 Location: 3767655-3768027 bp Feature: domain Description: zinc_ribbon_1 1 Location: 3767655-3768027 bp Feature: gene Location: 3768071-3768472 bp Ori: VCY80002.1 Feature: domain Description: zinc_ribbon_11 Location: 3768083-3768437 bp Feature: domain Description: zinc_ribbon_1 1 Location: 3768083-3768437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11233 (nitrogen assimilation transcriptional regulator; Provisional), cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), TnpB_IS66 (pfam05717), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII
GIIM (pfam08388), zinc_ribbon_11 (pfam11682)

Seq: UWXH01000002.1 (116814 bp)
Overview 1 RT 1: 6243-10614 bp Neighborhood of RT #1 [6243, 10622] ParE_toxin RVT-GII PRK15442 PinE Feature: gene Location: 6243-6410 bp Feature: gene Location: 6536-6739 bp Ori: VCY99459.1 Feature: domain Description: ParE_toxin Location: 6551-6734 bp Feature: domain Description: ParE_toxin Location: 6551-6734 bp Feature: gene Location: 6990-8405 bp Ori: VCY99461.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7275-7962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 75-7962 bp Feature: gene Location: 9022-9882 bp Ori: VCY99463.1 Feature: domain Description: PRK15442 Location: 9031-9880 bp Feature: domain Description: PRK15442 Location: 9031-9880 bp Feature: gene Location: 10065-10622 bp Ori: VCY99465.1 Gene: tnpR Feature: domain Description: PinE Location: 10068-10614 bp Feature: domain Description: PinE Location: 10068-10614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII, PRK15442 (beta-lactamase TEM; Provisional), PinE (COG1961)