myRT

myRT report for GCA_900608115.1_ecoli023

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Seq: UWXK01000002.1 (48575 bp)
Overview 1 RT 1: 16240-21444 bp Neighborhood of RT #1 [16240, 21449] RVT-GII Intron_maturas2 HNHc psiB Feature: gene Location: 16240-16554 bp Feature: gene Location: 17245-17454 bp Feature: gene Location: 17589-19490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17856-18687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7856-1 8687 bp Feature: domain Description: Intron_maturas2 Location: 18801-19059 bp Feature: domain Description: Intron_maturas2 Location: 1 8801 -1 9059 bp Feature: domain Description: HNHc Note: nucleases Location: 19233-19395 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9233-1 9395 bp Feature: gene Location: 19718-20962 bp Feature: gene Location: 21015-21449 bp Feature: domain Description: psiB Location: 21018-21444 bp Feature: domain Description: psiB Location: 21 01 8-21 444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), psiB (PRK13701)

Seq: UWXK01000001.1 (4967021 bp)
Overview 1 RT 1: 4010727-4019305 bp Neighborhood of RT #1 [4010727, 4019547] AidA AidA YeeP RT_G2_intron RVT-UG1 RVT-UG1 GerD Feature: gene Location: 4010727-4013648 bp Feature: domain Description: AidA Location: 4010841-4012803 bp Feature: domain Description: AidA Location: 4010841-4012 803 bp Feature: domain Description: AidA Location: 4012842-4013256 bp Feature: domain Description: AidA Location: 4012 842 -40132 56 bp Feature: gene Location: 4013946-4014818 bp Feature: domain Description: YeeP Location: 4013949-4014816 bp Feature: domain Description: YeeP Location: 4013949-4014816 bp Feature: gene Location: 4015422-4016147 bp Feature: domain Description: RT_G2_intron Location: 4015707-4015827 bp Feature: domain Description: RT_G2 _intron Location: 4015707-401582 7 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4016034-4016118 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4016034-4016118 bp Feature: gene Location: 4016228-4016707 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4016240-4016546 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 40162 40-4016546 bp Feature: gene Location: 4017026-4019104 bp Feature: gene Location: 4019113-4019547 bp Feature: domain Description: GerD Location: 4019191-4019305 bp Feature: domain Description: GerD Location: 4019191-4019305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RT_G2_intron (cd01651), RVT-UG1, GerD (pfam17898)