myRT

myRT report for GCA_900608215.1_kpneu038

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Seq: UWXU01000003.1 (87574 bp)
Overview 1 RT 1: 57064-60529 bp Neighborhood of RT #1 [57064, 60529] umuC PRK10276 RVT-GII Feature: gene Location: 57064-58335 bp Feature: domain Description: umuC Location: 57067-58327 bp Feature: domain Description: umuC Location: 57067-58327 bp Feature: gene Location: 58335-59165 bp Feature: domain Description: PRK10276 Location: 58785-59148 bp Feature: domain Description: PRK1 0276 Location: 58785-591 48 bp Feature: gene Location: 59290-60048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59572-59941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59572-59941 bp Feature: gene Location: 60148-60372 bp Feature: gene Location: 60395-60529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UWXU01000002.1 (235048 bp)
Overview 1 RT 1: 119899-123008 bp Neighborhood of RT #1 [119899, 123008] PRK10276 RVT-GII RVT-GII Feature: gene Location: 119899-120324 bp Feature: domain Description: PRK10276 Location: 119902-120310 bp Feature: domain Description: PRK102 76 Location: 119902 -12 0310 bp Feature: gene Location: 120340-120720 bp Feature: gene Location: 120847-121605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121129-121498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 112 9-12 1498 bp Feature: gene Location: 121605-121985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121608-121818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1608-12 1818 bp Feature: gene Location: 122123-122671 bp Feature: gene Location: 122730-123008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UWXU01000001.1 (5674259 bp)
Overview 1 RT 1: 797639-799457 bp 2 RT 2: 1239054-1241877 bp 3 RT 3: 1245877-1251620 bp 4 RT 4: 1585222-1589064 bp 5 RT 5: 1718930-1724806 bp 6 RT 6: 1986734-1992717 bp 7 RT 7: 3118569-3123446 bp Neighborhood of RT #1 [797639, 799457] RVT-GII Neighborhood of RT #2 [1239054, 1241877] int RVT-GII Neighborhood of RT #3 [1245877, 1251625] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1585222, 1589066] RVT-GII PRK10276 umuC Neighborhood of RT #5 [1718930, 1724808] Rve PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #6 [1986734, 1992911] Lipase_GDSL_2 RVT-GII PRK10276 Neighborhood of RT #7 [3118569, 3123451] YccC PRK10016 RVT-GII dacD Feature: gene Location: 797639-797851 bp Feature: gene Location: 797968-798111 bp Feature: gene Location: 797748-798443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798249-798393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798249-7983 93 bp Feature: gene Location: 798633-799049 bp Feature: gene Location: 799203-799457 bp Feature: gene Location: 1239054-1240106 bp Feature: domain Description: int Location: 1239057-1240056 bp Feature: domain Description: int Location: 123 9057-1240056 bp Feature: gene Location: 1240521-1240781 bp Feature: gene Location: 1240421-1241647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240919-1241531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240919-124153 1 bp Feature: gene Location: 1241671-1241877 bp Feature: gene Location: 1245877-1246734 bp Feature: domain Description: dam Location: 1245880-1246657 bp Feature: domain Description: dam Location: 1245880-1246657 bp Feature: gene Location: 1246731-1249145 bp Feature: domain Description: Phage_GPA Location: 1247295-1248261 bp Feature: domain Description: Phage_GPA Location: 1247295-1248261 bp Feature: gene Location: 1249827-1251092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250013-1250619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250013 -1250619 bp Feature: gene Location: 1251193-1251381 bp Feature: gene Location: 1251392-1251625 bp Feature: domain Description: DinI Location: 1251434-1251620 bp Feature: domain Description: DinI Location: 125143 4-1251620 bp Feature: gene Location: 1585222-1585368 bp Feature: gene Location: 1585611-1585763 bp Feature: gene Location: 1585936-1587300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1586218-1586908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1586218-1586908 bp Feature: gene Location: 1587379-1587798 bp Feature: domain Description: PRK10276 Location: 1587382-1587793 bp Feature: domain Description: PRK10276 Location: 15873 82-1587793 bp Feature: gene Location: 1587801-1589066 bp Feature: domain Description: umuC Location: 1587804-1589064 bp Feature: domain Description: umuC Location: 1587804-1589064 bp Feature: gene Location: 1718930-1719646 bp Feature: domain Description: Rve Location: 1718945-1719590 bp Feature: domain Description: Rve Location: 1718945-1719590 bp Feature: gene Location: 1719652-1720161 bp Feature: domain Description: PinE Location: 1719700-1720153 bp Feature: domain Description: PinE Location: 1719700-1720153 bp Feature: gene Location: 1721556-1722437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1721961-1722390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1721961-17223 90 bp Feature: gene Location: 1722437-1723042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1722440-1722650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1722440-1722650 bp Feature: gene Location: 1723122-1723541 bp Feature: domain Description: PRK10276 Location: 1723125-1723536 bp Feature: domain Description: PRK10276 Location: 1723 125-1723 53 6 bp Feature: gene Location: 1723543-1724808 bp Feature: domain Description: umuC Location: 1723546-1724806 bp Feature: domain Description: umuC Location: 1723 546-1724806 bp Feature: gene Location: 1986734-1987483 bp Feature: gene Location: 1987694-1990339 bp Feature: domain Description: Lipase_GDSL_2 Location: 1989758-1990292 bp Feature: domain Description: Lipase_GDSL_2 Location: 1989758-1990292 bp Feature: gene Location: 1990790-1992277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1991195-1991885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1991195-1991885 bp Feature: gene Location: 1992429-1992578 bp Feature: gene Location: 1992594-1992911 bp Feature: domain Description: PRK10276 Location: 1992600-1992717 bp Feature: domain Description: PRK10276 Location: 1992600-1992717 bp Feature: gene Location: 3118569-3119627 bp Feature: domain Description: YccC Location: 3118575-3119613 bp Feature: domain Description: YccC Location: 3 118575-3 119613 bp Feature: gene Location: 3119726-3120199 bp Feature: domain Description: PRK10016 Location: 3119729-3120188 bp Feature: domain Description: PRK10016 Location: 3 119729-3 120188 bp Feature: gene Location: 3120281-3121762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3120680-3121370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 120680-3 1213 70 bp Feature: gene Location: 3121771-3121938 bp Feature: gene Location: 3122282-3123451 bp Feature: domain Description: dacD Location: 3122291-3123446 bp Feature: domain Description: dacD Location: 3 122291-3 123 446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), Lipase_GDSL_2 (pfam13472)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)