myRT

myRT report for GCA_900608245.1_kpneu039

Download annotations/find similar RTs

Seq: UWXV01000002.1 (235528 bp)
Overview 1 RT 1: 734-4783 bp 2 RT 2: 216520-219405 bp Neighborhood of RT #1 [734, 4783] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #2 [216520, 219405] PRK10276 RVT-GII Feature: gene Location: 734-1684 bp Feature: domain Description: umuC Location: 737-1538 bp Feature: domain Description: umuC Location: 737-1 538 bp Feature: gene Location: 1684-2109 bp Feature: domain Description: PRK10276 Location: 1687-2095 bp Feature: domain Description: PRK1 0276 Location: 1 687-2095 bp Feature: gene Location: 2384-3097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2909-3056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2909-3056 bp Feature: gene Location: 3251-4021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3275-3596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3275-3596 bp Feature: gene Location: 4216-4446 bp Feature: gene Location: 4505-4783 bp Feature: gene Location: 216520-216849 bp Feature: domain Description: PRK10276 Location: 216523-216835 bp Feature: domain Description: PRK1 0276 Location: 21 6523-21 6835 bp Feature: gene Location: 217043-217255 bp Feature: gene Location: 217330-218739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217657-218347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7657-21 8347 bp Feature: gene Location: 218973-219203 bp Feature: gene Location: 219262-219405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UWXV01000001.1 (5438128 bp)
Overview 1 RT 1: 1357798-1364185 bp 2 RT 2: 1802713-1805514 bp 3 RT 3: 2146052-2149902 bp 4 RT 4: 2322795-2329857 bp 5 RT 5: 3559461-3563181 bp Neighborhood of RT #1 [1357798, 1364286] Laminin_G_3 RVT-GII RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1802713, 1805648] int RVT-GII RVT-GII group_II_RT_mat Neighborhood of RT #3 [2146052, 2149904] RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #4 [2322795, 2329859] PinE RVT-GII RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [3559461, 3563186] PRK10016 group_II_RT_mat RVT-GII dacD Feature: gene Location: 1357798-1360785 bp Feature: gene Location: 1360789-1361520 bp Feature: domain Description: Laminin_G_3 Location: 1361110-1361464 bp Feature: domain Description: Laminin_G_3 Location: 1361110-1361464 bp Feature: gene Location: 1362289-1363047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362571-1362940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362 571-1362 940 bp Feature: gene Location: 1363047-1363652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363050-1363260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363050-13632 60 bp Feature: gene Location: 1363742-1363921 bp Feature: gene Location: 1363969-1364286 bp Feature: domain Description: PRK10276 Location: 1363975-1364089 bp Feature: domain Description: PRK102 76 Location: 1363975-1364089 bp Feature: domain Description: PRK10276 Location: 1364116-1364185 bp Feature: domain Description: PRK102 76 Location: 1364116-1364185 bp Feature: gene Location: 1802713-1803765 bp Feature: domain Description: int Location: 1802716-1803715 bp Feature: domain Description: int Location: 1802 716-1803715 bp Feature: gene Location: 1803971-1804180 bp Feature: gene Location: 1804471-1804764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804570-1804714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804570-1804714 bp Feature: gene Location: 1804913-1805044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804937-1805000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804937-1805000 bp Feature: gene Location: 1805172-1805648 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1805229-1805514 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18052 2 9-1805514 bp Feature: gene Location: 2146052-2146198 bp Feature: gene Location: 2146443-2146655 bp Feature: gene Location: 2146802-2147251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147057-2147195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 147057-2 147195 bp Feature: gene Location: 2147400-2148017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147424-2147667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14742 4-2 147667 bp Feature: gene Location: 2148217-2148636 bp Feature: domain Description: PRK10276 Location: 2148220-2148631 bp Feature: domain Description: PRK102 76 Location: 2 1482 2 0-2 148631 bp Feature: gene Location: 2148639-2149904 bp Feature: domain Description: umuC Location: 2148642-2149902 bp Feature: domain Description: umuC Location: 2 148642 -2 149902 bp Feature: gene Location: 2322795-2323304 bp Feature: domain Description: PinE Location: 2322843-2323296 bp Feature: domain Description: PinE Location: 2 32 2 843-2 32 32 96 bp Feature: gene Location: 2324315-2324728 bp Feature: gene Location: 2325006-2326064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2325105-2325711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 5105-2 32 5711 bp Feature: gene Location: 2326399-2326611 bp Feature: gene Location: 2326912-2327487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2327011-2327380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 7011-2 32 7380 bp Feature: gene Location: 2327487-2327972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2327490-2327622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 7490-2 32 762 2 bp Feature: gene Location: 2327969-2328592 bp Feature: domain Description: PRK10276 Location: 2328176-2328587 bp Feature: domain Description: PRK102 76 Location: 2 32 8176-2 32 8587 bp Feature: gene Location: 2328594-2329859 bp Feature: domain Description: umuC Location: 2328597-2329857 bp Feature: domain Description: umuC Location: 2 32 8597-2 32 9857 bp Feature: gene Location: 3559461-3559934 bp Feature: domain Description: PRK10016 Location: 3559464-3559923 bp Feature: domain Description: PRK10016 Location: 3559464-355992 3 bp Feature: gene Location: 3560016-3560345 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3560022-3560211 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 356002 2 -35602 11 bp Feature: gene Location: 3560369-3561088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3560378-3560966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3560378-3560966 bp Feature: gene Location: 3561153-3561584 bp Feature: gene Location: 3562017-3563186 bp Feature: domain Description: dacD Location: 3562026-3563181 bp Feature: domain Description: dacD Location: 3562 02 6-3563181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), group_II_RT_mat (TIGR04416), umuC (PRK03609), PinE (COG1961), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)