myRT

myRT report for GCA_900608325.1_kpneu046

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Seq: UWYC01000002.1 (191460 bp)
Overview 1 RT 1: 51274-54966 bp Neighborhood of RT #1 [51274, 54980] Antirestrict RVT-GII RVT-GII PRK10276 Feature: gene Location: 51274-51699 bp Feature: domain Description: Antirestrict Location: 51409-51697 bp Feature: domain Description: Antirestrict Location: 51 409-51 697 bp Feature: gene Location: 51737-51958 bp Feature: gene Location: 52220-53299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52235-52367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52235-52367 bp Feature: gene Location: 53515-54156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53920-54145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53920-541 45 bp Feature: gene Location: 54162-54539 bp Feature: gene Location: 54555-54980 bp Feature: domain Description: PRK10276 Location: 54558-54966 bp Feature: domain Description: PRK1 0276 Location: 54558-54966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UWYC01000001.1 (5350983 bp)
Overview 1 RT 1: 1055743-1060616 bp 2 RT 2: 4642390-4655643 bp 3 RT 3: 4992642-4996751 bp 4 RT 4: 5176634-5181784 bp 5 RT 5: 5258193-5261886 bp Neighborhood of RT #1 [1055743, 1060621] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [4642390, 4655648] YbjK int RVT-GII RVT-GII Phage_CP76 Phage_GPA RVT-GII RVT-GII DinI Neighborhood of RT #3 [4992642, 4996753] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [5176634, 5181786] PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [5258193, 5261891] Laminin_G_3 RVT-GII RVT-GII PRK10597 Feature: gene Location: 1055743-1056801 bp Feature: domain Description: YccC Location: 1055749-1056787 bp Feature: domain Description: YccC Location: 1055749-1056787 bp Feature: gene Location: 1056900-1057373 bp Feature: domain Description: PRK10016 Location: 1056903-1057362 bp Feature: domain Description: PRK10016 Location: 1056903-1057362 bp Feature: gene Location: 1057455-1058933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057851-1058541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057851-1058541 bp Feature: gene Location: 1058942-1059091 bp Feature: gene Location: 1059452-1060621 bp Feature: domain Description: dacD Location: 1059461-1060616 bp Feature: domain Description: dacD Location: 1059461-1060616 bp Feature: gene Location: 4642390-4642953 bp Feature: domain Description: YbjK Location: 4642396-4642933 bp Feature: domain Description: YbjK Location: 4642 396-4642 933 bp Feature: gene Location: 4643076-4644128 bp Feature: domain Description: int Location: 4643079-4644078 bp Feature: domain Description: int Location: 4643079-4644078 bp Feature: gene Location: 4644544-4645425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4644949-4645318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4644949-4645318 bp Feature: gene Location: 4645425-4646162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4645428-4645638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464542 8-4645638 bp Feature: gene Location: 4648094-4648315 bp Feature: gene Location: 4648348-4648857 bp Feature: domain Description: Phage_CP76 Location: 4648360-4648828 bp Feature: domain Description: Phage_CP76 Location: 4648360-464882 8 bp Feature: gene Location: 4650749-4653163 bp Feature: domain Description: Phage_GPA Location: 4651313-4652279 bp Feature: domain Description: Phage_GPA Location: 4651313-4652 2 79 bp Feature: gene Location: 4653507-4653896 bp Feature: gene Location: 4653935-4654510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654034-4654403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654034-4654403 bp Feature: gene Location: 4654510-4655115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654513-4654723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654513-465472 3 bp Feature: gene Location: 4655216-4655404 bp Feature: gene Location: 4655415-4655648 bp Feature: domain Description: DinI Location: 4655457-4655643 bp Feature: domain Description: DinI Location: 4655457-4655643 bp Feature: gene Location: 4992642-4992884 bp Feature: domain Description: DinI Location: 4992693-4992873 bp Feature: domain Description: DinI Location: 4992 693-4992 873 bp Feature: gene Location: 4992899-4993045 bp Feature: gene Location: 4993499-4994986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4993904-4994594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4993904-4994594 bp Feature: gene Location: 4995066-4995485 bp Feature: domain Description: PRK10276 Location: 4995069-4995480 bp Feature: domain Description: PRK102 76 Location: 4995069-4995480 bp Feature: gene Location: 4995488-4996753 bp Feature: domain Description: umuC Location: 4995491-4996751 bp Feature: domain Description: umuC Location: 4995491-4996751 bp Feature: gene Location: 5176634-5177143 bp Feature: domain Description: PinE Location: 5176682-5177135 bp Feature: domain Description: PinE Location: 5176682 -5177135 bp Feature: gene Location: 5178538-5178801 bp Feature: gene Location: 5178438-5179415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5178939-5179308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5178939-5179308 bp Feature: gene Location: 5179415-5180020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5179418-5179628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5179418-517962 8 bp Feature: gene Location: 5180100-5180519 bp Feature: domain Description: PRK10276 Location: 5180103-5180514 bp Feature: domain Description: PRK102 76 Location: 5180103-5180514 bp Feature: gene Location: 5180521-5181786 bp Feature: domain Description: umuC Location: 5180524-5181784 bp Feature: domain Description: umuC Location: 518052 4-5181784 bp Feature: gene Location: 5258193-5258924 bp Feature: domain Description: Laminin_G_3 Location: 5258529-5258868 bp Feature: domain Description: Laminin_G_3 Location: 52 5852 9-52 58868 bp Feature: gene Location: 5259371-5259580 bp Feature: gene Location: 5259878-5260453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5259977-5260346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 59977-52 60346 bp Feature: gene Location: 5260453-5261058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5260456-5260666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 60456-52 60666 bp Feature: gene Location: 5261118-5261327 bp Feature: gene Location: 5261643-5261891 bp Feature: domain Description: PRK10597 Location: 5261646-5261886 bp Feature: domain Description: PRK10597 Location: 52 61646-52 61886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), YbjK (COG3226), int (PHA02601), Phage_CP76 (pfam06892), Phage_GPA (pfam05840), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
umuC (PRK03609), PinE (COG1961), Laminin_G_3 (pfam13385), PRK10597 (DNA damage-inducible protein I; Provisional)