myRT

myRT report for GCA_900608405.1_kpneu049

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Seq: UWYI01000001.1 (5481084 bp)
Overview 1 RT 1: 1260239-1265109 bp 2 RT 2: 2499007-2504298 bp 3 RT 3: 2691153-2695004 bp 4 RT 4: 3035404-3039016 bp 5 RT 5: 3477210-3483339 bp Neighborhood of RT #1 [1260239, 1265123] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [2499007, 2504298] umuC PRK10276 RVT-GII PinE Neighborhood of RT #3 [2691153, 2695004] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #4 [3035404, 3039036] group_II_RT_mat RVT-GII int YbjK Neighborhood of RT #5 [3477210, 3483339] group_II_RT_mat RVT-GII Laminin_G_3 Feature: gene Location: 1260239-1261408 bp Feature: domain Description: dacD Location: 1260248-1261403 bp Feature: domain Description: dacD Location: 1 260248-1 261 403 bp Feature: gene Location: 1261925-1262191 bp Feature: gene Location: 1261825-1263411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262329-1263019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 262329-1 26301 9 bp Feature: gene Location: 1263493-1263966 bp Feature: domain Description: PRK10016 Location: 1263496-1263955 bp Feature: domain Description: PRK1 001 6 Location: 1 263496-1 263955 bp Feature: gene Location: 1264050-1265123 bp Feature: domain Description: YccC Location: 1264071-1265109 bp Feature: domain Description: YccC Location: 1 264071 -1 2651 09 bp Feature: gene Location: 2499007-2500272 bp Feature: domain Description: umuC Location: 2499010-2500270 bp Feature: domain Description: umuC Location: 249901 0-2500270 bp Feature: gene Location: 2500274-2500693 bp Feature: domain Description: PRK10276 Location: 2500277-2500688 bp Feature: domain Description: PRK1 0276 Location: 2500277-2500688 bp Feature: gene Location: 2500772-2502256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2501174-2501864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2501 1 74-2501 864 bp Feature: gene Location: 2503652-2504161 bp Feature: domain Description: PinE Location: 2503700-2504153 bp Feature: domain Description: PinE Location: 2503700-25041 53 bp Feature: gene Location: 2504167-2504298 bp Feature: gene Location: 2691153-2692418 bp Feature: domain Description: umuC Location: 2691156-2692416 bp Feature: domain Description: umuC Location: 2691 1 56-269241 6 bp Feature: gene Location: 2692421-2692840 bp Feature: domain Description: PRK10276 Location: 2692424-2692835 bp Feature: domain Description: PRK1 0276 Location: 2692424-2692835 bp Feature: gene Location: 2692919-2693524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2692922-2693132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2692922-26931 32 bp Feature: gene Location: 2693505-2694401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2693907-2694237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2693907-2694237 bp Feature: gene Location: 2694410-2694577 bp Feature: gene Location: 2694858-2695004 bp Feature: gene Location: 3035404-3035733 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3035410-3035599 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 303541 0-3035599 bp Feature: gene Location: 3035757-3036983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3036255-3036867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3036255-3036867 bp Feature: gene Location: 3037299-3038351 bp Feature: domain Description: int Location: 3037302-3038301 bp Feature: domain Description: int Location: 3037302-3038301 bp Feature: gene Location: 3038473-3039036 bp Feature: domain Description: YbjK Location: 3038479-3039016 bp Feature: domain Description: YbjK Location: 3038479-303901 6 bp Feature: gene Location: 3477210-3477389 bp Feature: gene Location: 3477479-3477808 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3477485-3477674 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3477485-3477674 bp Feature: gene Location: 3477832-3478962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3478234-3478840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3478234-3478840 bp Feature: gene Location: 3479617-3480348 bp Feature: domain Description: Laminin_G_3 Location: 3479938-3480292 bp Feature: domain Description: Laminin_G_3 Location: 3479938-3480292 bp Feature: gene Location: 3480352-3483339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), group_II_RT_mat (TIGR04416), int (PHA02601), YbjK (COG3226)
Laminin_G_3 (pfam13385)