myRT

myRT report for GCA_900608415.1_kpneu052

Download annotations/find similar RTs

Seq: UWYL01000001.1 (5469502 bp)
Overview 1 RT 1: 483351-488232 bp 2 RT 2: 3713742-3717139 bp 3 RT 3: 4157425-4160665 bp 4 RT 4: 4509359-4513463 bp 5 RT 5: 4694567-4699714 bp Neighborhood of RT #1 [483351, 488237] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [3713742, 3717240] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #3 [4157425, 4161057] YbjK int RVT-GII RVT-GII Neighborhood of RT #4 [4509359, 4513465] DinI RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [4694567, 4699716] PinE RVT-GII RVT-GII PRK10276 umuC Feature: gene Location: 483351-484409 bp Feature: domain Description: YccC Location: 483357-484395 bp Feature: domain Description: YccC Location: 483357-484395 bp Feature: gene Location: 484508-484981 bp Feature: domain Description: PRK10016 Location: 484511-484970 bp Feature: domain Description: PRK1 001 6 Location: 48451 1 -484970 bp Feature: gene Location: 485063-486547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485465-486155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485465-4861 55 bp Feature: gene Location: 486556-486723 bp Feature: gene Location: 487068-488237 bp Feature: domain Description: dacD Location: 487077-488232 bp Feature: domain Description: dacD Location: 487077-488232 bp Feature: gene Location: 3713742-3714473 bp Feature: domain Description: Laminin_G_3 Location: 3714063-3714417 bp Feature: domain Description: Laminin_G_3 Location: 371 4063-371 441 7 bp Feature: gene Location: 3714920-3715132 bp Feature: gene Location: 3715335-3716606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3715524-3716214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 5524-371 621 4 bp Feature: gene Location: 3716696-3716875 bp Feature: gene Location: 3716923-3717240 bp Feature: domain Description: PRK10276 Location: 3716929-3717043 bp Feature: domain Description: PRK1 0276 Location: 371 6929-371 7043 bp Feature: domain Description: PRK10276 Location: 3717070-3717139 bp Feature: domain Description: PRK1 0276 Location: 371 7070-371 71 39 bp Feature: gene Location: 4157425-4157988 bp Feature: domain Description: YbjK Location: 4157431-4157968 bp Feature: domain Description: YbjK Location: 41 57431 -41 57968 bp Feature: gene Location: 4158111-4159163 bp Feature: domain Description: int Location: 4158114-4159113 bp Feature: domain Description: int Location: 41 581 1 4-41 591 1 3 bp Feature: gene Location: 4159575-4160471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4159977-4160307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 59977-41 60307 bp Feature: gene Location: 4160452-4161057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4160455-4160665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 60455-41 60665 bp Feature: gene Location: 4509359-4509601 bp Feature: domain Description: DinI Location: 4509410-4509590 bp Feature: domain Description: DinI Location: 450941 0-4509590 bp Feature: gene Location: 4509616-4509762 bp Feature: gene Location: 4510216-4511094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4510621-4511056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 0621 -451 1 056 bp Feature: gene Location: 4511094-4511699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4511097-4511307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 1 097-451 1 307 bp Feature: gene Location: 4511778-4512197 bp Feature: domain Description: PRK10276 Location: 4511781-4512192 bp Feature: domain Description: PRK1 0276 Location: 451 1 781 -451 21 92 bp Feature: gene Location: 4512200-4513465 bp Feature: domain Description: umuC Location: 4512203-4513463 bp Feature: domain Description: umuC Location: 451 2203-451 3463 bp Feature: gene Location: 4694567-4695076 bp Feature: domain Description: PinE Location: 4694615-4695068 bp Feature: domain Description: PinE Location: 469461 5-4695068 bp Feature: gene Location: 4696262-4696474 bp Feature: gene Location: 4696371-4697345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4696872-4697259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4696872-4697259 bp Feature: gene Location: 4697345-4697950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4697348-4697558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4697348-4697558 bp Feature: gene Location: 4698030-4698449 bp Feature: domain Description: PRK10276 Location: 4698033-4698444 bp Feature: domain Description: PRK1 0276 Location: 4698033-4698444 bp Feature: gene Location: 4698451-4699716 bp Feature: domain Description: umuC Location: 4698454-4699714 bp Feature: domain Description: umuC Location: 4698454-469971 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), Laminin_G_3 (pfam13385), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: UWYL01000002.1 (282684 bp)
Overview 1 RT 1: 194542-198993 bp Neighborhood of RT #1 [194542, 198995] PRK09928 RVT-GII RVT-GII BetT DDE_Tnp_IS1 Feature: gene Location: 194542-195039 bp Feature: domain Description: PRK09928 Location: 194563-195037 bp Feature: domain Description: PRK0992 8 Location: 194563-195037 bp Feature: gene Location: 195226-195438 bp Feature: gene Location: 195513-196316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195840-196209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195840-1962 09 bp Feature: gene Location: 196316-196921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196319-196529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196319-19652 9 bp Feature: gene Location: 196970-198454 bp Feature: domain Description: BetT Location: 197006-198446 bp Feature: domain Description: BetT Location: 197006-198446 bp Feature: gene Location: 198600-198995 bp Feature: domain Description: DDE_Tnp_IS1 Location: 198606-198993 bp Feature: domain Description: DDE_Tnp_IS1 Location: 198606-198993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09928 (choline transport protein BetT; Provisional), RVT-GII, BetT (COG1292), DDE_Tnp_IS1 (pfam03400)