myRT

myRT report for GCA_900608445.1_kpneu054

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Seq: UWYN01000001.1 (5464006 bp)
Overview 1 RT 1: 2849144-2855276 bp 2 RT 2: 3294133-3299367 bp 3 RT 3: 3638217-3641317 bp 4 RT 4: 3822413-3827563 bp 5 RT 5: 5061457-5067941 bp Neighborhood of RT #1 [2849144, 2855276] Laminin_G_3 RVT-GII RVT-GII group_II_RT_mat Neighborhood of RT #2 [3294133, 3299367] int RVT-GII Neighborhood of RT #3 [3638217, 3641319] RVT-GII PRK10276 umuC Neighborhood of RT #4 [3822413, 3827565] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [5061457, 5067943] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 2849144-2852131 bp Feature: gene Location: 2852135-2852866 bp Feature: domain Description: Laminin_G_3 Location: 2852456-2852810 bp Feature: domain Description: Laminin_G_3 Location: 2852456-285281 0 bp Feature: gene Location: 2853522-2854403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2853927-2854296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2853927-2854296 bp Feature: gene Location: 2854403-2854654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2854406-2854538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2854406-2854538 bp Feature: gene Location: 2854678-2855007 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2854684-2854873 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2854684-2854873 bp Feature: gene Location: 2855097-2855276 bp Feature: gene Location: 3294133-3295185 bp Feature: domain Description: int Location: 3294136-3295135 bp Feature: domain Description: int Location: 32941 36-32951 35 bp Feature: gene Location: 3295428-3295715 bp Feature: gene Location: 3295718-3296848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296000-3296681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296000-3296681 bp Feature: gene Location: 3296948-3297205 bp Feature: gene Location: 3299146-3299367 bp Feature: gene Location: 3638217-3638570 bp Feature: gene Location: 3638590-3638877 bp Feature: gene Location: 3638948-3639553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638951-3639161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3638951 -36391 61 bp Feature: gene Location: 3639632-3640051 bp Feature: domain Description: PRK10276 Location: 3639635-3640046 bp Feature: domain Description: PRK1 0276 Location: 3639635-3640046 bp Feature: gene Location: 3640054-3641319 bp Feature: domain Description: umuC Location: 3640057-3641317 bp Feature: domain Description: umuC Location: 3640057-3641 31 7 bp Feature: gene Location: 3822413-3822922 bp Feature: domain Description: PinE Location: 3822461-3822914 bp Feature: domain Description: PinE Location: 3822461 -382291 4 bp Feature: gene Location: 3824108-3824320 bp Feature: gene Location: 3824618-3825799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3824717-3825407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382471 7-3825407 bp Feature: gene Location: 3825879-3826298 bp Feature: domain Description: PRK10276 Location: 3825882-3826293 bp Feature: domain Description: PRK1 0276 Location: 3825882-3826293 bp Feature: gene Location: 3826300-3827565 bp Feature: domain Description: umuC Location: 3826303-3827563 bp Feature: domain Description: umuC Location: 3826303-3827563 bp Feature: gene Location: 5061457-5062515 bp Feature: domain Description: YccC Location: 5061463-5062501 bp Feature: domain Description: YccC Location: 5061 463-5062501 bp Feature: gene Location: 5062614-5063087 bp Feature: domain Description: PRK10016 Location: 5062617-5063076 bp Feature: domain Description: PRK1 001 6 Location: 506261 7-5063076 bp Feature: gene Location: 5063169-5064653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5063571-5064261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5063571 -5064261 bp Feature: gene Location: 5065175-5066344 bp Feature: domain Description: dacD Location: 5065184-5066339 bp Feature: domain Description: dacD Location: 50651 84-5066339 bp Feature: gene Location: 5066519-5067943 bp Feature: domain Description: SbcB Location: 5066525-5067941 bp Feature: domain Description: SbcB Location: 5066525-5067941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, group_II_RT_mat (TIGR04416), int (PHA02601), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)
SbcB (COG2925)