myRT

myRT report for GCA_900608485.1_kpneu058

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Seq: UWYR01000002.1 (286719 bp)
Overview 1 RT 1: 92954-96224 bp Neighborhood of RT #1 [92954, 96238] RVT-GII PRK10276 Feature: gene Location: 92954-93169 bp Feature: gene Location: 93436-93666 bp Feature: gene Location: 93900-95411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94305-95019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94305-9501 9 bp Feature: gene Location: 95462-95695 bp Feature: gene Location: 95813-96238 bp Feature: domain Description: PRK10276 Location: 95816-96224 bp Feature: domain Description: PRK1 0276 Location: 9581 6-96224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UWYR01000001.1 (5364615 bp)
Overview 1 RT 1: 373508-380677 bp 2 RT 2: 5228103-5234785 bp Neighborhood of RT #1 [373508, 380694] EAL RVT-UG4 FimD FimC Neighborhood of RT #2 [5228103, 5234785] COG3440 RVT-Retrons HTH_XRE Feature: gene Location: 373508-373714 bp Feature: gene Location: 373804-374658 bp Feature: domain Description: EAL Location: 374488-374641 bp Feature: domain Description: EAL Location: 374488-374641 bp Feature: gene Location: 375295-377325 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 375703-376147 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 375703-376147 bp Feature: gene Location: 377325-379934 bp Feature: domain Description: FimD Location: 377382-379923 bp Feature: domain Description: FimD Location: 377382 -37992 3 bp Feature: gene Location: 379966-380694 bp Feature: domain Description: FimC Location: 380014-380677 bp Feature: domain Description: FimC Location: 380014-380677 bp Feature: gene Location: 5228103-5229161 bp Feature: domain Description: COG3440 Location: 5228733-5229120 bp Feature: domain Description: COG3440 Location: 52 2 8733-52 2 912 0 bp Feature: gene Location: 5229360-5233211 bp Feature: gene Location: 5233252-5234169 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5233348-5233915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 33348-52 33915 bp Feature: gene Location: 5234204-5234494 bp Feature: domain Description: HTH_XRE Location: 5234216-5234381 bp Feature: domain Description: HTH_XRE Location: 52 342 16-52 34381 bp Feature: gene Location: 5234546-5234785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121), COG3440 (Predicted restriction endonuclease ), RVT-Retrons, HTH_XRE (smart00530)