myRT

myRT report for GCA_900610325.1_77-SE569_S9_R1.fastq.gz

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Seq: UXFV01000002.1 (15979 bp)
Overview 1 RT 1: 4765-10495 bp Neighborhood of RT #1 [4765, 10557] YjgR YjgR RVT-UG2 Pept_S41_N Feature: gene Location: 4765-6687 bp Feature: domain Description: YjgR Location: 5170-5377 bp Feature: domain Description: YjgR Location: 51 70-5377 bp Feature: domain Description: YjgR Location: 6163-6631 bp Feature: domain Description: YjgR Location: 61 63-6631 bp Feature: gene Location: 6740-7027 bp Feature: gene Location: 7413-8945 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7638-8565 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7638-8565 bp Feature: gene Location: 9171-10262 bp Feature: gene Location: 10243-10557 bp Feature: domain Description: Pept_S41_N Location: 10405-10495 bp Feature: domain Description: Pept_S41 _N Location: 1 0405-1 0495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjgR (COG0433), RVT-UG2, Pept_S41_N (pfam18294)

Seq: UXFV01000005.1 (13388 bp)
Overview 1 RT 1: 258-10964 bp Neighborhood of RT #1 [258, 11134] TPR NERD UvrD_C_2 RVT-UG2 COG0610 DUF4372 DDE_Tnp_1 Feature: gene Location: 258-1646 bp Feature: domain Description: TPR Location: 1290-1527 bp Feature: domain Description: TPR Location: 12 90-152 7 bp Feature: gene Location: 1706-4687 bp Feature: domain Description: NERD Location: 1805-2084 bp Feature: domain Description: NERD Location: 1805-2 084 bp Feature: domain Description: UvrD_C_2 Location: 3827-3956 bp Feature: domain Description: UvrD_C_2 Location: 382 7-3956 bp Feature: gene Location: 4706-6262 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4976-5918 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4976-5918 bp Feature: gene Location: 6705-9734 bp Feature: domain Description: COG0610 Location: 6732-9681 bp Feature: domain Description: COG0610 Location: 6732 -9681 bp Feature: gene Location: 9971-11134 bp Feature: domain Description: DUF4372 Location: 9980-10196 bp Feature: domain Description: DUF4372 Location: 9980-10196 bp Feature: domain Description: DDE_Tnp_1 Location: 10337-10964 bp Feature: domain Description: DDE_Tnp_1 Location: 10337-10964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), NERD (pfam08378), UvrD_C_2 (pfam13538), RVT-UG2, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609)