myRT

myRT report for GCA_900610335.1_75-SE568_S7_R1.fastq.gz

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Seq: UXFU01000080.1 (15330 bp)
Overview 1 RT 1: 4313-15070 bp Neighborhood of RT #1 [4313, 15189] DUF4372 DDE_Tnp_1 COG0610 RVT-UG2 NERD UvrD_C_2 TPR Feature: gene Location: 4313-5476 bp Feature: domain Description: DUF4372 Location: 4322-4538 bp Feature: domain Description: DUF4372 Location: 4322-4538 bp Feature: domain Description: DDE_Tnp_1 Location: 4679-5306 bp Feature: domain Description: DDE_Tnp_1 Location: 4679-5306 bp Feature: gene Location: 5713-8742 bp Feature: domain Description: COG0610 Location: 5740-8689 bp Feature: domain Description: COG061 0 Location: 5740-8689 bp Feature: gene Location: 9185-10741 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 9455-10397 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 9455-1 0397 bp Feature: gene Location: 10760-13741 bp Feature: domain Description: NERD Location: 10859-11138 bp Feature: domain Description: NERD Location: 1 0859-1 1 1 38 bp Feature: domain Description: UvrD_C_2 Location: 12881-13010 bp Feature: domain Description: UvrD_C_2 Location: 1 2881 -1 301 0 bp Feature: gene Location: 13801-15189 bp Feature: domain Description: TPR Location: 14833-15070 bp Feature: domain Description: TPR Location: 1 4833-1 5070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG2, NERD (pfam08378), UvrD_C_2 (pfam13538), TPR (smart00028)

Seq: UXFU01000064.1 (9247 bp)
Overview 1 RT 1: 2047-8838 bp Neighborhood of RT #1 [2047, 9026] Pept_S41_N RVT-UG2 YjgR YjgR SIR2_2 Feature: gene Location: 2047-2325 bp Feature: domain Description: Pept_S41_N Location: 2173-2263 bp Feature: domain Description: Pept_S41_N Location: 2 173-2 2 63 bp Feature: gene Location: 2342-3433 bp Feature: gene Location: 3659-5191 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3884-4811 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3884-4811 bp Feature: gene Location: 5917-7839 bp Feature: domain Description: YjgR Location: 6322-6529 bp Feature: domain Description: YjgR Location: 632 2 -652 9 bp Feature: domain Description: YjgR Location: 7315-7783 bp Feature: domain Description: YjgR Location: 7315-7783 bp Feature: gene Location: 7839-9026 bp Feature: domain Description: SIR2_2 Location: 8331-8838 bp Feature: domain Description: SIR2 _2 Location: 8331-8838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pept_S41_N (pfam18294), RVT-UG2, YjgR (COG0433), SIR2_2 (pfam13289)