myRT

myRT report for GCA_900624765.1_82A3

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Seq: UYXE01000002.1 (740133 bp)
Overview 1 RT 1: 198106-202960 bp 2 RT 2: 389457-394829 bp 3 RT 3: 514277-519240 bp Neighborhood of RT #1 [198106, 202960] RVT-UG27 Neighborhood of RT #2 [389457, 394840] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Neighborhood of RT #3 [514277, 519240] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 198106-198708 bp Feature: gene Location: 198695-199096 bp Feature: gene Location: 199086-200351 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 199275-199911 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 99275-1 9991 1 bp Feature: gene Location: 201383-201844 bp Feature: gene Location: 201866-202960 bp Feature: gene Location: 389457-390575 bp Feature: domain Description: Bac_Flav_CT_G Location: 389640-390561 bp Feature: domain Description: Bac_Flav_CT_G Location: 389640-390561 bp Feature: gene Location: 390754-390903 bp Feature: gene Location: 391111-392820 bp Feature: domain Description: RVT_N Location: 391213-391456 bp Feature: domain Description: RVT_N Location: 391 21 3-391 456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391501-392149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 501 -3921 49 bp Feature: domain Description: GIIM Note: maturase Location: 392203-392434 bp Feature: domain Description: GIIM Note: maturase Location: 392203-392434 bp Feature: gene Location: 392817-394511 bp Feature: domain Description: Bac_Flav_CT_G Location: 392937-394503 bp Feature: domain Description: Bac_Flav_CT_G Location: 392937-394503 bp Feature: gene Location: 394526-394840 bp Feature: domain Description: DUF3876 Location: 394580-394829 bp Feature: domain Description: DUF3876 Location: 394580-394829 bp Feature: gene Location: 514277-514699 bp Feature: domain Description: Cas_Cmr5 Location: 514349-514676 bp Feature: domain Description: Cas_Cmr5 Location: 51 4349-51 4676 bp Feature: gene Location: 514696-515484 bp Feature: domain Description: Cmr6_III-B Location: 514774-515473 bp Feature: domain Description: Cmr6_III-B Location: 51 4774-51 5473 bp Feature: gene Location: 515517-517790 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 515727-516330 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 51 5727-51 6330 bp Feature: domain Description: Cas1_I-II-III Location: 516792-517752 bp Feature: domain Description: Cas1 _I-II-III Location: 51 6792-51 7752 bp Feature: gene Location: 518219-518413 bp Feature: gene Location: 519085-519240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992), Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: UYXE01000026.1 (6887 bp)
Overview 1 RT 1: 2885-5885 bp Neighborhood of RT #1 [2885, 5885] RVT-GII GIIM Feature: gene Location: 2885-3292 bp Feature: gene Location: 3338-3580 bp Feature: gene Location: 3863-5158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4058-4673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4058-4673 bp Feature: domain Description: GIIM Note: maturase Location: 4745-4958 bp Feature: domain Description: GIIM Note: maturase Location: 4745-4958 bp Feature: gene Location: 5391-5555 bp Feature: gene Location: 5688-5885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)