myRT

myRT report for GCA_900624795.1_81H8

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Seq: UYXG01000002.1 (479412 bp)
Overview 1 RT 1: 448293-458512 bp Neighborhood of RT #1 [448293, 458523] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 448293-450122 bp Feature: gene Location: 450185-450538 bp Feature: gene Location: 450529-451950 bp Feature: domain Description: DUF1566 Location: 450601-450745 bp Feature: domain Description: DUF1 566 Location: 450601 -450745 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 450934-451675 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 450934-451 675 bp Feature: gene Location: 451963-452364 bp Feature: domain Description: Avd_like Location: 452002-452341 bp Feature: domain Description: Avd_like Location: 452002-452341 bp Feature: gene Location: 452494-458523 bp Feature: domain Description: DUF1566 Location: 458209-458512 bp Feature: domain Description: DUF1 566 Location: 458209-45851 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: UYXG01000019.1 (116411 bp)
Overview 1 RT 1: 94575-98232 bp Neighborhood of RT #1 [94575, 98232] RVT-UG27 Feature: gene Location: 94575-95171 bp Feature: gene Location: 95526-95735 bp Feature: gene Location: 96052-97320 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 96241-96877 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 962 41-96877 bp Feature: gene Location: 97317-97547 bp Feature: gene Location: 97630-98232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: UYXG01000028.1 (76056 bp)
Overview 1 RT 1: 12244-17534 bp Neighborhood of RT #1 [12244, 17569] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 12244-14277 bp Feature: domain Description: Bac_Flav_CT_G Location: 12247-14272 bp Feature: domain Description: Bac_Flav_CT_G Location: 12247-14272 bp Feature: gene Location: 14470-14817 bp Feature: gene Location: 14855-16555 bp Feature: domain Description: RVT_N Location: 14954-15197 bp Feature: domain Description: RVT_N Location: 14954-15197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15242-15890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15242-15890 bp Feature: domain Description: GIIM Note: maturase Location: 15941-16175 bp Feature: domain Description: GIIM Note: maturase Location: 15941-16175 bp Feature: gene Location: 16558-17148 bp Feature: domain Description: Bac_Flav_CT_G Location: 16675-17131 bp Feature: domain Description: Bac_Flav_CT_G Location: 16675-1713 1 bp Feature: gene Location: 17189-17569 bp Feature: domain Description: DUF3876 Location: 17270-17534 bp Feature: domain Description: DUF3 876 Location: 17270-1753 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992)

Seq: UYXG01000007.1 (264925 bp)
Overview 1 RT 1: 185911-189290 bp Neighborhood of RT #1 [185911, 189290] RVT-DGRs Feature: gene Location: 185911-187230 bp Feature: gene Location: 187260-187463 bp Feature: gene Location: 187747-188562 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 188080-188404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 188080-1884 04 bp Feature: gene Location: 188528-188758 bp Feature: gene Location: 188706-189290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: UYXG01000010.1 (218360 bp)
Overview 1 RT 1: 128570-140527 bp Neighborhood of RT #1 [128570, 140527] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 128570-130369 bp Feature: domain Description: rpsA Location: 128639-130253 bp Feature: domain Description: rpsA Location: 128639-13025 3 bp Feature: gene Location: 130538-136366 bp Feature: domain Description: DUF4011 Location: 131693-132206 bp Feature: domain Description: DUF4011 Location: 131693-132206 bp Feature: domain Description: DEXXQc_SF1 Location: 132545-133145 bp Feature: domain Description: DEXXQc_SF1 Location: 1325 45 -133145 bp Feature: domain Description: DEXXQc_SF1 Location: 133982-134732 bp Feature: domain Description: DEXXQc_SF1 Location: 133982-134732 bp Feature: domain Description: SF1_C_Upf1 Location: 134741-135254 bp Feature: domain Description: SF1_C_Upf1 Location: 134741-135 25 4 bp Feature: domain Description: MTES_1575 Location: 135404-135692 bp Feature: domain Description: MTES_15 75 Location: 135 404-135 692 bp Feature: domain Description: DUF3320 Location: 135872-136016 bp Feature: domain Description: DUF3320 Location: 135 872-136016 bp Feature: gene Location: 136400-137533 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136724-137276 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136724-137276 bp Feature: gene Location: 137739-139925 bp Feature: gene Location: 140327-140527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons