myRT

myRT report for GCA_900624875.1_82C1

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Seq: UYXK01000032.1 (2796 bp)
Overview 1 RT 1: 1-2795 bp Neighborhood of RT #1 [1, 2795] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-138 bp Feature: gene Location: 607-2481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 -1 753 bp Feature: domain Description: Intron_maturas2 Location: 1864-2131 bp Feature: domain Description: Intron_maturas2 Location: 1 864-21 31 bp Feature: domain Description: HNHc Note: nucleases Location: 2302-2452 bp Feature: domain Description: HNHc Note: nucleases Location: 2302-2452 bp Feature: gene Location: 2445-2795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: UYXK01000002.1 (437655 bp)
Overview 1 RT 1: 224-3727 bp 2 RT 2: 244792-254961 bp Neighborhood of RT #1 [224, 3741] RVT-UG24 dnaG Neighborhood of RT #2 [244792, 254961] YWFCY RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII GIIM RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 224-1987 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 737-1205 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 737-12 05 bp Feature: gene Location: 1977-2696 bp Feature: gene Location: 2701-3741 bp Feature: domain Description: dnaG Location: 2785-3727 bp Feature: domain Description: dnaG Location: 2 785-372 7 bp Feature: gene Location: 244792-245523 bp Feature: domain Description: YWFCY Location: 244798-244975 bp Feature: domain Description: YWFCY Location: 2 44798-2 44975 bp Feature: gene Location: 245644-245883 bp Feature: gene Location: 246071-247903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246356-247175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 46356-2 47175 bp Feature: domain Description: Intron_maturas2 Location: 247250-247559 bp Feature: domain Description: Intron_maturas2 Location: 2 472 50-2 47559 bp Feature: domain Description: HNHc Note: nucleases Location: 247733-247877 bp Feature: domain Description: HNHc Note: nucleases Location: 2 47733-2 47877 bp Feature: gene Location: 247890-248234 bp Feature: gene Location: 248872-250524 bp Feature: domain Description: RVT_N Location: 248926-249169 bp Feature: domain Description: RVT_N Location: 2 4892 6-2 49169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249214-249862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 492 14-2 49862 bp Feature: domain Description: GIIM Note: maturase Location: 249916-250147 bp Feature: domain Description: GIIM Note: maturase Location: 2 49916-2 50147 bp Feature: gene Location: 250445-250738 bp Feature: gene Location: 250766-251281 bp Feature: gene Location: 251283-253088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251547-252369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 51547-2 52 369 bp Feature: domain Description: Intron_maturas2 Location: 252447-252777 bp Feature: domain Description: Intron_maturas2 Location: 2 52 447-2 52 777 bp Feature: domain Description: HNHc Note: nucleases Location: 252921-253065 bp Feature: domain Description: HNHc Note: nucleases Location: 2 52 92 1-2 53065 bp Feature: gene Location: 253075-254253 bp Feature: domain Description: TraG-D_C Location: 253600-253933 bp Feature: domain Description: TraG-D_C Location: 2 53600-2 53933 bp Feature: gene Location: 254425-254961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, dnaG (TIGR01391), YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: UYXK01000023.1 (10089 bp)
Overview 1 RT 1: 6626-10088 bp Neighborhood of RT #1 [6626, 10087] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 6626-7564 bp Feature: domain Description: Bac_Flav_CT_G Location: 6629-7550 bp Feature: domain Description: Bac_Flav_CT_G Location: 6629-7550 bp Feature: gene Location: 7743-7892 bp Feature: gene Location: 8148-9809 bp Feature: domain Description: RVT_N Location: 8202-8445 bp Feature: domain Description: RVT_N Location: 8202-8445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8490-9138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8490-913 8 bp Feature: domain Description: GIIM Note: maturase Location: 9192-9423 bp Feature: domain Description: GIIM Note: maturase Location: 9192-9423 bp Feature: gene Location: 9806-10087 bp Feature: domain Description: Bac_Flav_CT_G Location: 9926-10088 bp Feature: domain Description: Bac_Flav_CT_G Location: 9926-10088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)