myRT

myRT report for GCA_900624995.1_DSM_15318T

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Seq: UYXQ01000013.1 (96544 bp)
Overview 1 RT 1: 58644-65857 bp Neighborhood of RT #1 [58644, 65904] INT_Rci_Hp1_C RVT-UG1 Peptidase_C14 Feature: gene Location: 58644-59717 bp Feature: domain Description: INT_Rci_Hp1_C Location: 59151-59652 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 591 51 -59652 bp Feature: gene Location: 59832-60053 bp Feature: gene Location: 60324-64175 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 60987-61533 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 60987-61 533 bp Feature: gene Location: 64381-65430 bp Feature: gene Location: 65584-65904 bp Feature: domain Description: Peptidase_C14 Location: 65593-65857 bp Feature: domain Description: Peptidase_C1 4 Location: 65593-65857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT-UG1, Peptidase_C14 (pfam00656)

Seq: UYXQ01000052.1 (25699 bp)
Overview 1 RT 1: 19918-24397 bp Neighborhood of RT #1 [19918, 24450] Avd_like RVT-DGRs Asp_Ala_antiprt Glu-decarb-GAD Feature: gene Location: 19918-20229 bp Feature: gene Location: 20226-20582 bp Feature: domain Description: Avd_like Location: 20253-20556 bp Feature: domain Description: Avd_like Location: 2 02 53-2 0556 bp Feature: gene Location: 20828-21913 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21089-21704 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 1089-2 1704 bp Feature: gene Location: 22005-23036 bp Feature: domain Description: Asp_Ala_antiprt Location: 22188-22989 bp Feature: domain Description: Asp_Ala_antiprt Location: 2 2 188-2 2 989 bp Feature: gene Location: 23029-24450 bp Feature: domain Description: Glu-decarb-GAD Location: 23122-24397 bp Feature: domain Description: Glu-decarb-GAD Location: 2 312 2 -2 4397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Asp_Ala_antiprt (TIGR03802), Glu-decarb-GAD (TIGR01788)

Seq: UYXQ01000068.1 (21157 bp)
Overview 1 RT 1: 17649-21065 bp Neighborhood of RT #1 [17649, 21154] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 17649-17984 bp Feature: domain Description: TnpB_IS66 Location: 17667-17955 bp Feature: domain Description: TnpB_IS66 Location: 17667-17955 bp Feature: gene Location: 18007-19467 bp Feature: domain Description: LZ_Tnp_IS66 Location: 18193-18403 bp Feature: domain Description: LZ_Tnp_IS66 Location: 18193 -18403 bp Feature: domain Description: zf-IS66 Location: 18433-18559 bp Feature: domain Description: zf-IS66 Location: 1843 3 -18559 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18601-19426 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18601-19426 bp Feature: gene Location: 19859-21154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20132-20783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013 2-20783 bp Feature: domain Description: GIIM Note: maturase Location: 20861-21065 bp Feature: domain Description: GIIM Note: maturase Location: 20861-21065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: UYXQ01000214.1 (3761 bp)
Overview 1 RT 1: 443-3759 bp Neighborhood of RT #1 [443, 3759] RVT-GII PinE Feature: gene Location: 443-1060 bp Feature: gene Location: 1073-1591 bp Feature: gene Location: 1710-2525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1716-2208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1716-2208 bp Feature: gene Location: 2898-3470 bp Feature: domain Description: PinE Location: 2901-3441 bp Feature: domain Description: PinE Location: 2901-34 4 1 bp Feature: gene Location: 3634-3759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961)