myRT

myRT report for GCA_900626275.1_PRJEB22712

Download annotations/find similar RTs

Seq: LR131143.1 (724747 bp)
Overview 1 RT 1: 580014-581832 bp Neighborhood of RT #1 [580014, 581832] AcrR retropepsin_like_bacteria RVT-GII Feature: gene Location: 580014-580610 bp Feature: domain Description: AcrR Location: 580029-580503 bp Feature: domain Description: AcrR Location: 580029-580503 bp Feature: gene Location: 580673-580981 bp Feature: domain Description: retropepsin_like_bacteria Location: 580691-580928 bp Feature: domain Description: retropepsin_like_bacteria Location: 580691 -580928 bp Feature: gene Location: 581035-581244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581044-581236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581 044-581 236 bp Feature: gene Location: 581343-581666 bp Feature: gene Location: 581617-581832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), retropepsin_like_bacteria (cd05483), RVT-GII

Seq: LR131145.1 (1225108 bp)
Overview 1 RT 1: 1112524-1117195 bp Neighborhood of RT #1 [1112524, 1117195] TIGR00003 ZntA RVT-GII GIIM XerD Feature: gene Location: 1112524-1112757 bp Feature: domain Description: TIGR00003 Location: 1112536-1112731 bp Feature: domain Description: TIGR00003 Location: 1112 536-1112 731 bp Feature: gene Location: 1112951-1114831 bp Feature: domain Description: ZntA Location: 1113029-1114820 bp Feature: domain Description: ZntA Location: 111302 9-111482 0 bp Feature: gene Location: 1115185-1116159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1115191-1115758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1115191-1115758 bp Feature: domain Description: GIIM Note: maturase Location: 1115812-1116043 bp Feature: domain Description: GIIM Note: maturase Location: 1115812 -1116043 bp Feature: gene Location: 1116285-1116830 bp Feature: domain Description: XerD Location: 1116291-1116822 bp Feature: domain Description: XerD Location: 11162 91-111682 2 bp Feature: gene Location: 1117037-1117195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00003 (copper ion binding protein), ZntA (COG2217), RVT-GII, GIIM (pfam08388), XerD (COG4974)

Seq: LR131144.1 (1740551 bp)
Overview 1 RT 1: 894181-898790 bp Neighborhood of RT #1 [894181, 898801] YadS R_switched_YjbE RVT-GII GIIM YphP_YqiW Feature: gene Location: 894181-894798 bp Feature: domain Description: YadS Location: 894190-894790 bp Feature: domain Description: YadS Location: 894190-894790 bp Feature: gene Location: 894818-895486 bp Feature: domain Description: R_switched_YjbE Location: 894851-895367 bp Feature: domain Description: R_switched_YjbE Location: 894851-8953 67 bp Feature: gene Location: 896235-897563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896490-897183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896490-897183 bp Feature: domain Description: GIIM Note: maturase Location: 897273-897477 bp Feature: domain Description: GIIM Note: maturase Location: 897273 -897477 bp Feature: gene Location: 897913-898044 bp Feature: gene Location: 898370-898801 bp Feature: domain Description: YphP_YqiW Location: 898388-898790 bp Feature: domain Description: YphP_YqiW Location: 8983 88-898790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YadS (COG2860), R_switched_YjbE (TIGR03717), RVT-GII, GIIM (pfam08388), YphP_YqiW (TIGR04191)