myRT

myRT report for GCA_900638755.1_14207_7_35-2

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Seq: CAAAHG010000007.1 (195201 bp)
Overview 1 RT 1: 65-3547 bp 2 RT 2: 164118-169625 bp Neighborhood of RT #1 [65, 3547] RVT-GII Neighborhood of RT #2 [164118, 169625] DUF3801 VirD4 RVT-GII YodL DUF4316 TTRAP Feature: gene Location: 65-220 bp Feature: gene Location: 261-416 bp Feature: gene Location: 440-2290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710-1454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 0-1 454 bp Feature: gene Location: 2320-3294 bp Feature: gene Location: 3083-3547 bp Feature: gene Location: 164118-164600 bp Feature: domain Description: DUF3801 Location: 164193-164556 bp Feature: domain Description: DUF3801 Location: 1 641 93-1 64556 bp Feature: gene Location: 164597-166000 bp Feature: domain Description: VirD4 Location: 164813-165971 bp Feature: domain Description: VirD4 Location: 1 6481 3-1 65971 bp Feature: gene Location: 166586-169048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166820-167516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 66820-1 6751 6 bp Feature: domain Description: YodL Location: 168266-168560 bp Feature: domain Description: YodL Location: 1 68266-1 68560 bp Feature: domain Description: DUF4316 Location: 168764-168905 bp Feature: domain Description: DUF431 6 Location: 1 68764-1 68905 bp Feature: gene Location: 169051-169257 bp Feature: domain Description: TTRAP Location: 169063-169240 bp Feature: domain Description: TTRAP Location: 1 69063-1 69240 bp Feature: gene Location: 169404-169625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAAHG010000015.1 (108617 bp)
Overview 1 RT 1: 71907-77542 bp Neighborhood of RT #1 [71907, 77550] VirD4 Maff2 RVT-GII HNHc YozG TnpV Feature: gene Location: 71907-73730 bp Feature: domain Description: VirD4 Location: 72159-73605 bp Feature: domain Description: VirD4 Location: 72 159-73605 bp Feature: gene Location: 73851-73988 bp Feature: domain Description: Maff2 Location: 73860-73986 bp Feature: domain Description: Maff2 Location: 73860-73986 bp Feature: gene Location: 74708-76594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75041-75779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75041-75779 bp Feature: domain Description: HNHc Note: nucleases Location: 76325-76478 bp Feature: domain Description: HNHc Note: nucleases Location: 7632 5-76478 bp Feature: gene Location: 76941-77213 bp Feature: domain Description: YozG Location: 76950-77151 bp Feature: domain Description: YozG Location: 76950-77151 bp Feature: gene Location: 77173-77550 bp Feature: domain Description: TnpV Location: 77218-77542 bp Feature: domain Description: TnpV Location: 772 18-77542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAAHG010000034.1 (8479 bp)
Overview 1 RT 1: 4800-8229 bp Neighborhood of RT #1 [4800, 8408] KdgK PRK05718 RVT-GII GIIM Feature: gene Location: 4800-5852 bp Feature: domain Description: KdgK Location: 4812-5784 bp Feature: domain Description: KdgK Location: 4812-5784 bp Feature: gene Location: 5871-6509 bp Feature: domain Description: PRK05718 Location: 5877-6489 bp Feature: domain Description: PRK05718 Location: 5877-6489 bp Feature: gene Location: 7017-8408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7332-7956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 3 2-7956 bp Feature: domain Description: GIIM Note: maturase Location: 8013-8229 bp Feature: domain Description: GIIM Note: maturase Location: 8013 -8229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAAHG010000003.1 (311317 bp)
Overview 1 RT 1: 105217-107906 bp Neighborhood of RT #1 [105217, 107906] Avd_like RVT-DGRs Feature: gene Location: 105217-105639 bp Feature: domain Description: Avd_like Location: 105283-105589 bp Feature: domain Description: Avd_like Location: 105283-105589 bp Feature: gene Location: 105672-106001 bp Feature: gene Location: 106009-107127 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 106216-106879 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 106216-106879 bp Feature: gene Location: 107105-107269 bp Feature: gene Location: 107310-107906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAAHG010000031.1 (16178 bp)
Overview 1 RT 1: 5142-8543 bp Neighborhood of RT #1 [5142, 8543] RVT-GII TraC-F-type Feature: gene Location: 5142-5273 bp Feature: gene Location: 5369-5647 bp Feature: gene Location: 5658-7631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6018-6756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6018-675 6 bp Feature: gene Location: 7675-8136 bp Feature: domain Description: TraC-F-type Location: 7744-7981 bp Feature: domain Description: TraC-F-type Location: 7744-7981 bp Feature: gene Location: 8217-8543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT