myRT

myRT report for GCA_900639765.1_Leg_busanensis_BAA518.v1

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Seq: CAAAHP010000005.1 (280999 bp)
Overview 1 RT 1: 237673-243822 bp Neighborhood of RT #1 [237673, 243857] COG3547 COG3547 RVT-GII PRK11242 COG3435 Feature: gene Location: 237673-238602 bp Feature: domain Description: COG3547 Location: 237766-238546 bp Feature: domain Description: COG3547 Location: 237766-238546 bp Feature: gene Location: 238920-239951 bp Feature: domain Description: COG3547 Location: 238935-239898 bp Feature: domain Description: COG3547 Location: 238935-239898 bp Feature: gene Location: 240448-241611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240733-241417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240733-241 41 7 bp Feature: gene Location: 242387-243265 bp Feature: domain Description: PRK11242 Location: 242390-243197 bp Feature: domain Description: PRK1 1 242 Location: 242390-2431 97 bp Feature: gene Location: 243378-243857 bp Feature: domain Description: COG3435 Location: 243579-243822 bp Feature: domain Description: COG3435 Location: 243579-243822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, PRK11242 (DNA-binding transcriptional regulator CynR; Provisional), COG3435 (Gentisate 1,2-dioxygenase )

Seq: CAAAHP010000016.1 (19071 bp)
Overview 1 RT 1: 10063-15428 bp Neighborhood of RT #1 [10063, 15445] RVT_N RVT-GII GIIM EndA PRK15137 Feature: gene Location: 10063-10206 bp Feature: gene Location: 10352-12028 bp Feature: gene Location: 12603-14060 bp Feature: domain Description: RVT_N Location: 12654-12897 bp Feature: domain Description: RVT_N Location: 12 654-12 897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12942-13563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 942 -13563 bp Feature: domain Description: GIIM Note: maturase Location: 13617-13851 bp Feature: domain Description: GIIM Note: maturase Location: 13617-13851 bp Feature: gene Location: 14711-15010 bp Feature: domain Description: EndA Location: 14741-14981 bp Feature: domain Description: EndA Location: 14741-14981 bp Feature: gene Location: 15146-15445 bp Feature: domain Description: PRK15137 Location: 15179-15428 bp Feature: domain Description: PRK15137 Location: 15179-1542 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), EndA (COG2356), PRK15137 (DNA-specific endonuclease I; Provisional)

Seq: CAAAHP010000001.1 (762748 bp)
Overview 1 RT 1: 174-4783 bp Neighborhood of RT #1 [174, 4783] RVT-AbiP2 SIR2_2 Feature: gene Location: 174-1703 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1095 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 621-1095 bp Feature: gene Location: 1716-2732 bp Feature: domain Description: SIR2_2 Location: 2070-2595 bp Feature: domain Description: SIR2_2 Location: 2070-2595 bp Feature: gene Location: 3110-4783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, SIR2_2 (pfam13289)