myRT

myRT report for GCA_900639965.1_Leg_pneumophila_Los_Angeles_1.v1

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Seq: CAAAIG010000001.1 Legionella pneumophila subsp. fraseri strain Los Angeles 1 genome assembly, contig: .L_pneumo_subs_frasei_S3_L001_R1_001.1, whole genome shotgun sequence (624668 bp)
Overview 1 RT 1: 7038-11496 bp Neighborhood of RT #1 [7038, 11496] Avd_like DUF1566 RVT-DGRs DUF772 Feature: gene Location: 7038-7391 bp Feature: domain Description: Avd_like Location: 7065-7371 bp Feature: domain Description: Avd_like Location: 7065-7371 bp Feature: gene Location: 7416-7697 bp Feature: domain Description: DUF1566 Location: 7476-7656 bp Feature: domain Description: DUF1 566 Location: 7476-7656 bp Feature: gene Location: 7730-8929 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7949-8645 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7949-8645 bp Feature: gene Location: 8948-10408 bp Feature: domain Description: DUF772 Location: 9131-9323 bp Feature: domain Description: DUF772 Location: 91 31 -9323 bp Feature: gene Location: 10489-11496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), RVT-DGRs, DUF772 (pfam05598)

Seq: CAAAIG010000019.1 Legionella pneumophila subsp. fraseri strain Los Angeles 1 genome assembly, contig: .L_pneumo_subs_frasei_S3_L001_R1_001.19, whole genome shotgun sequence (52293 bp)
Overview 1 RT 1: 83-3122 bp Neighborhood of RT #1 [83, 3214] RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 83-286 bp Feature: gene Location: 580-1734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-982 bp Feature: domain Description: RVT_1 Location: 1036-1354 bp Feature: domain Description: RVT_1 Location: 1036-1354 bp Feature: domain Description: GIIM Note: maturase Location: 1432-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1432 -1651 bp Feature: gene Location: 2271-2564 bp Feature: domain Description: InsE Location: 2280-2544 bp Feature: domain Description: InsE Location: 2 2 80-2 544 bp Feature: gene Location: 2654-3214 bp Feature: domain Description: HTH_23 Location: 2741-2864 bp Feature: domain Description: HTH_2 3 Location: 2 741-2 864 bp Feature: domain Description: HTH_33 Location: 2957-3122 bp Feature: domain Description: HTH_33 Location: 2 957-312 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: CAAAIG010000037.1 Legionella pneumophila subsp. fraseri strain Los Angeles 1 genome assembly, contig: .L_pneumo_subs_frasei_S3_L001_R1_001.37, whole genome shotgun sequence (8417 bp)
Overview 1 RT 1: 157-4256 bp Neighborhood of RT #1 [157, 4256] RVT-UG18 Feature: gene Location: 157-1488 bp Feature: gene Location: 1642-1944 bp Feature: gene Location: 1966-2331 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1969-2329 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1969-23 29 bp Feature: gene Location: 2829-3842 bp Feature: gene Location: 4113-4256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18