myRT

myRT report for GCA_900640105.1_Leg_gormanii_03-69.v1

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Seq: CAAAIV010000009.1 (14198 bp)
Overview 1 RT 1: 234-3960 bp Neighborhood of RT #1 [234, 3960] RVT-DGRs Feature: gene Location: 234-767 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 237-393 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 237-393 bp Feature: gene Location: 1240-2259 bp Feature: gene Location: 2554-3960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAAIV010000129.1 (14443 bp)
Overview 1 RT 1: 6370-12862 bp Neighborhood of RT #1 [6370, 12876] TraW PRK13737 RVT_N RVT-GII GIIM HNHc TrbC_Ftype TraN_Ftype Feature: gene Location: 6370-7005 bp Feature: domain Description: TraW Location: 6400-6988 bp Feature: domain Description: TraW Location: 6400-6988 bp Feature: gene Location: 6998-7972 bp Feature: domain Description: PRK13737 Location: 7058-7970 bp Feature: domain Description: PRK13737 Location: 7058-7970 bp Feature: gene Location: 8605-10299 bp Feature: domain Description: RVT_N Location: 8650-8890 bp Feature: domain Description: RVT_N Location: 8650-8890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8938-9580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8938-9580 bp Feature: domain Description: GIIM Note: maturase Location: 9634-9868 bp Feature: domain Description: GIIM Note: maturase Location: 9634-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 10102-10258 bp Feature: domain Description: HNHc Note: nucleases Location: 10102 -102 58 bp Feature: gene Location: 10323-11072 bp Feature: domain Description: TrbC_Ftype Location: 10668-11061 bp Feature: domain Description: TrbC_Ftype Location: 10668-11061 bp Feature: gene Location: 11065-12876 bp Feature: domain Description: TraN_Ftype Location: 11098-12862 bp Feature: domain Description: TraN_Ftype Location: 11098-12 862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraW (TIGR02743), PRK13737 (conjugal transfer pilus assembly protein TraU; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), TrbC_Ftype (TIGR02742), TraN_Ftype (TIGR02750)

Seq: CAAAIV010000111.1 (8743 bp)
Overview 1 RT 1: 5870-8740 bp Neighborhood of RT #1 [5870, 8740] RVT-UG4 Feature: gene Location: 5870-6013 bp Feature: gene Location: 6494-6817 bp Feature: gene Location: 7065-8033 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7581-8025 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7581-8025 bp Feature: gene Location: 8591-8740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4