myRT

myRT report for GCA_900659625.1_LMG29178_FinalContigs.fasta.gz

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Seq: CAACUZ010000031.1 (74965 bp)
Overview 1 RT 1: 8723-12705 bp Neighborhood of RT #1 [8723, 12743] Acetyltransf_1 RVT-GII DDE_Tnp_1_assoc DDE_Tnp_1 CitB Feature: gene Location: 8723-8950 bp Feature: domain Description: Acetyltransf_1 Location: 8765-8876 bp Feature: domain Description: Acetyltransf_1 Location: 8765-8876 bp Feature: gene Location: 9087-9419 bp Feature: gene Location: 9957-10382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10221-10365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0221 -1 0365 bp Feature: gene Location: 10468-11625 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 10564-10822 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 0564-1 0822 bp Feature: domain Description: DDE_Tnp_1 Location: 10849-11530 bp Feature: domain Description: DDE_Tnp_1 Location: 1 0849-1 1 530 bp Feature: gene Location: 12069-12743 bp Feature: domain Description: CitB Location: 12096-12705 bp Feature: domain Description: CitB Location: 1 2096-1 2705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609), CitB (TIGR02484)

Seq: CAACUZ010000092.1 (22627 bp)
Overview 1 RT 1: 3255-8852 bp Neighborhood of RT #1 [3255, 8852] DDE_Tnp_4 RVT-GII GIIM Amino_oxidase Feature: gene Location: 3255-3896 bp Feature: domain Description: DDE_Tnp_4 Location: 3549-3750 bp Feature: domain Description: DDE_Tnp_4 Location: 3549-3750 bp Feature: gene Location: 4823-5149 bp Feature: gene Location: 5215-6213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5221-5782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 2 1-5782 bp Feature: domain Description: GIIM Note: maturase Location: 5869-6085 bp Feature: domain Description: GIIM Note: maturase Location: 5869-6085 bp Feature: gene Location: 7253-8566 bp Feature: domain Description: Amino_oxidase Location: 7298-8543 bp Feature: domain Description: Amino_oxidase Location: 72 98-8543 bp Feature: gene Location: 8652-8852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_4 (pfam13359), RVT-GII, GIIM (pfam08388), Amino_oxidase (pfam01593)