myRT

myRT report for GCA_900696075.2_ERZ807198

Download annotations/find similar RTs

Seq: CAADFB020000012.1 (337301 bp)
Overview 1 RT 1: 303903-309565 bp Neighborhood of RT #1 [303903, 309565] DUF3223 RVT-GII Intron_maturas2 Feature: gene Location: 303903-305420 bp Feature: gene Location: 305458-306510 bp Feature: domain Description: DUF3223 Location: 305863-306100 bp Feature: domain Description: DUF3223 Location: 305863-3061 00 bp Feature: gene Location: 306590-308212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307001-307448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307001 -307448 bp Feature: domain Description: Intron_maturas2 Location: 307580-307841 bp Feature: domain Description: Intron_maturas2 Location: 307580-307841 bp Feature: gene Location: 308543-308959 bp Feature: gene Location: 308975-309565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3223 (pfam11523), RVT-GII, Intron_maturas2 (pfam01348)

Seq: CAADFB020000005.1 (20411 bp)
Overview 1 RT 1: 15542-17591 bp Neighborhood of RT #1 [15542, 17683] RVT-GII InsE TnpB_IS66 Feature: gene Location: 15542-15838 bp Feature: gene Location: 15885-16082 bp Feature: gene Location: 16291-16635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16303-16513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16303-16513 bp Feature: gene Location: 16861-17241 bp Feature: domain Description: InsE Location: 16933-17140 bp Feature: domain Description: InsE Location: 16933-17140 bp Feature: gene Location: 17276-17683 bp Feature: domain Description: TnpB_IS66 Location: 17306-17591 bp Feature: domain Description: TnpB_IS66 Location: 17306-17591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963), TnpB_IS66 (pfam05717)

Seq: CAADFB020000041.1 (345750 bp)
Overview 1 RT 1: 7710-11598 bp 2 RT 2: 34924-39786 bp Neighborhood of RT #1 [7710, 11648] DDE_Tnp_IS66 DDE_Tnp_IS66_C COG3436 RVT-GII GIIM RVT-GII TnpB_IS66 Neighborhood of RT #2 [34924, 39857] RVT-GII HTH_Tnp_1 TnpB_IS66 RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 7710-8606 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7977-8421 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7977-8421 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8442-8553 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8442-8553 bp Feature: gene Location: 8284-9369 bp Feature: domain Description: COG3436 Location: 8608-9091 bp Feature: domain Description: COG3 43 6 Location: 8608-9091 bp Feature: gene Location: 9610-10443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9628-10090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9628-10090 bp Feature: domain Description: GIIM Note: maturase Location: 10162-10378 bp Feature: domain Description: GIIM Note: maturase Location: 10162-103 78 bp Feature: gene Location: 10391-10876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10676-10841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10676-10841 bp Feature: gene Location: 10913-11200 bp Feature: gene Location: 11337-11648 bp Feature: domain Description: TnpB_IS66 Location: 11340-11598 bp Feature: domain Description: TnpB_IS66 Location: 113 40-11598 bp Feature: gene Location: 34924-35070 bp Feature: gene Location: 35071-35319 bp Feature: gene Location: 35392-35637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35407-35569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5407-3 5569 bp Feature: gene Location: 35685-36083 bp Feature: domain Description: HTH_Tnp_1 Location: 35724-35904 bp Feature: domain Description: HTH_Tnp_1 Location: 3 5724-3 5904 bp Feature: gene Location: 36080-36298 bp Feature: domain Description: TnpB_IS66 Location: 36107-36257 bp Feature: domain Description: TnpB_IS66 Location: 3 6107-3 6257 bp Feature: gene Location: 36860-38086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37022-37679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7022-3 7679 bp Feature: domain Description: GIIM Note: maturase Location: 37760-37985 bp Feature: domain Description: GIIM Note: maturase Location: 3 7760-3 7985 bp Feature: gene Location: 38120-38314 bp Feature: domain Description: TnpB_IS66 Location: 38144-38285 bp Feature: domain Description: TnpB_IS66 Location: 3 8144-3 8285 bp Feature: gene Location: 38436-39857 bp Feature: domain Description: LZ_Tnp_IS66 Location: 38511-38742 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3 8511-3 8742 bp Feature: domain Description: zf-IS66 Location: 38757-38892 bp Feature: domain Description: zf-IS66 Location: 3 8757-3 8892 bp Feature: domain Description: DDE_Tnp_IS66 Location: 38937-39786 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 893 7-3 9786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)

Seq: CAADFB020000020.1 (60487 bp)
Overview 1 RT 1: 2769-6077 bp Neighborhood of RT #1 [2769, 6112] RVT-GII RVT-GII Tra5 Feature: gene Location: 2769-2954 bp Feature: gene Location: 2927-3409 bp Feature: gene Location: 3514-3702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3532-3697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3532-3697 bp Feature: gene Location: 3719-4072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3926-4061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3926-4 061 bp Feature: gene Location: 4536-4922 bp Feature: gene Location: 5495-6112 bp Feature: domain Description: Tra5 Location: 5663-6077 bp Feature: domain Description: Tra5 Location: 5663-6077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801)

Seq: CAADFB020000016.1 (129257 bp)
Overview 1 RT 1: 126331-129007 bp Neighborhood of RT #1 [126331, 129007] TnpB_IS66 RVT-GII GIIM TnpB_IS66 Feature: gene Location: 126331-126549 bp Feature: domain Description: TnpB_IS66 Location: 126358-126508 bp Feature: domain Description: TnpB_IS66 Location: 12635 8-1265 08 bp Feature: gene Location: 126570-126731 bp Feature: gene Location: 127111-128337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127273-127930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127273-127930 bp Feature: domain Description: GIIM Note: maturase Location: 128011-128236 bp Feature: domain Description: GIIM Note: maturase Location: 128011-128236 bp Feature: gene Location: 128371-128583 bp Feature: domain Description: TnpB_IS66 Location: 128395-128533 bp Feature: domain Description: TnpB_IS66 Location: 128395 -1285 33 bp Feature: gene Location: 128720-129007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388)