myRT

myRT report for GCA_900696165.1_1743Da3b

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Seq: CAADHG010000962.1 (1646 bp)
Overview 1 RT 1: 62-1587 bp Neighborhood of RT #1 [62, 1643] COG5606 RVT-CRISPR-like GIIM Feature: gene Location: 62-259 bp Feature: gene Location: 428-901 bp Feature: domain Description: COG5606 Location: 593-860 bp Feature: domain Description: COG5606 Location: 593-860 bp Feature: gene Location: 1146-1643 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1149-1314 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 1 49-1 31 4 bp Feature: domain Description: GIIM Note: maturase Location: 1356-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1 356-1 587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5606 (Predicted DNA-binding protein, XRE-type HTH domain ), RVT-CRISPR, GIIM (pfam08388)

Seq: CAADHG010000620.1 (2635 bp)
Overview 1 RT 1: 514-2576 bp Neighborhood of RT #1 [514, 2632] ribD RVT-CRISPR-like GIIM Feature: gene Location: 514-1611 bp Feature: domain Description: ribD Location: 517-1588 bp Feature: domain Description: ribD Location: 517-1588 bp Feature: gene Location: 1705-1920 bp Feature: gene Location: 2135-2632 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2138-2303 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 138-2 303 bp Feature: domain Description: GIIM Note: maturase Location: 2345-2576 bp Feature: domain Description: GIIM Note: maturase Location: 2 345-2 576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ribD (PRK10786), RVT-CRISPR, GIIM (pfam08388)

Seq: CAADHG010000068.1 (7652 bp)
Overview 1 RT 1: 150-2965 bp Neighborhood of RT #1 [150, 2967] RVT-GII GIIM trmE Feature: gene Location: 150-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171-489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171-489 bp Feature: domain Description: GIIM Note: maturase Location: 528-753 bp Feature: domain Description: GIIM Note: maturase Location: 528-753 bp Feature: gene Location: 1119-1403 bp Feature: gene Location: 1588-2967 bp Feature: domain Description: trmE Location: 1639-2965 bp Feature: domain Description: trmE Location: 163 9-2965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), trmE (PRK05291)

Seq: CAADHG010000624.1 (2618 bp)
Overview 1 RT 1: 97-2559 bp Neighborhood of RT #1 [97, 2615] COG1033 RVT-CRISPR-like GIIM Feature: gene Location: 97-1803 bp Feature: domain Description: COG1033 Location: 163-1786 bp Feature: domain Description: COG1033 Location: 163-1786 bp Feature: gene Location: 2118-2615 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2121-2286 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2121-2286 bp Feature: domain Description: GIIM Note: maturase Location: 2328-2559 bp Feature: domain Description: GIIM Note: maturase Location: 2328-2559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1033 (Predicted exporter protein, RND superfamily ), RVT-CRISPR, GIIM (pfam08388)