myRT

myRT report for GCA_900696175.1_1743Fa3b

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Seq: CAADHE010000044.1 (8389 bp)
Overview 1 RT 1: 5423-8178 bp Neighborhood of RT #1 [5423, 8240] trmE RVT-GII GIIM Feature: gene Location: 5423-6802 bp Feature: domain Description: trmE Location: 5474-6800 bp Feature: domain Description: trmE Location: 5474-6800 bp Feature: gene Location: 6987-7271 bp Feature: gene Location: 7575-8240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7596-7914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7596-791 4 bp Feature: domain Description: GIIM Note: maturase Location: 7953-8178 bp Feature: domain Description: GIIM Note: maturase Location: 7953-81 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trmE (PRK05291), RVT-GII, GIIM (pfam08388)

Seq: CAADHE010000155.1 (5554 bp)
Overview 1 RT 1: 71-5464 bp Neighborhood of RT #1 [71, 5481] COG5635 COG5635 NtrY RVT-GII GIIM HTH_ARSR Feature: gene Location: 71-2560 bp Feature: domain Description: COG5635 Location: 701-1181 bp Feature: domain Description: COG5635 Location: 701-1181 bp Feature: domain Description: COG5635 Location: 1556-1901 bp Feature: domain Description: COG5635 Location: 1556-1901 bp Feature: domain Description: NtrY Location: 2276-2534 bp Feature: domain Description: NtrY Location: 2 2 76-2 534 bp Feature: gene Location: 2682-2924 bp Feature: gene Location: 3417-4580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3633-4254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3633-42 54 bp Feature: domain Description: GIIM Note: maturase Location: 4293-4524 bp Feature: domain Description: GIIM Note: maturase Location: 42 93-452 4 bp Feature: gene Location: 5164-5481 bp Feature: domain Description: HTH_ARSR Location: 5239-5464 bp Feature: domain Description: HTH_ARSR Location: 52 39-5464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), NtrY (COG5000), RVT-GII, GIIM (pfam08388), HTH_ARSR (smart00418)

Seq: CAADHE010000016.1 (10737 bp)
Overview 1 RT 1: 6690-10257 bp Neighborhood of RT #1 [6690, 10451] mmdA RVT-GII GIIM Feature: gene Location: 6690-8237 bp Feature: domain Description: mmdA Location: 6711-8235 bp Feature: domain Description: mmdA Location: 6711-823 5 bp Feature: gene Location: 8311-8448 bp Feature: gene Location: 9096-10451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9405-10029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9405-10029 bp Feature: domain Description: GIIM Note: maturase Location: 10071-10257 bp Feature: domain Description: GIIM Note: maturase Location: 10071-10257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mmdA (TIGR01117), RVT-GII, GIIM (pfam08388)