myRT

myRT report for GCA_900699155.1_44927_B02-4

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Seq: CAADHN010000002.1 (3264872 bp)
Overview 1 RT 1: 15328-17870 bp 2 RT 2: 2661732-2670568 bp Neighborhood of RT #1 [15328, 17870] PHA02517 RVT-GII GIIM Neighborhood of RT #2 [2661732, 2670576] PRK07209 RVT-UG5 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HsdM Feature: gene Location: 15328-15576 bp Feature: gene Location: 15703-16200 bp Feature: domain Description: PHA02517 Location: 15730-16183 bp Feature: domain Description: PHA0251 7 Location: 1 5730-1 61 83 bp Feature: gene Location: 16253-17494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16451-17108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6451 -1 71 08 bp Feature: domain Description: GIIM Note: maturase Location: 17186-17417 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 86-1 741 7 bp Feature: gene Location: 17501-17665 bp Feature: gene Location: 17742-17870 bp Feature: gene Location: 2661732-2661860 bp Feature: gene Location: 2662002-2663285 bp Feature: domain Description: PRK07209 Location: 2662014-2663283 bp Feature: domain Description: PRK07209 Location: 266201 4-2663283 bp Feature: gene Location: 2663410-2666652 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2663941-2664433 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2663941 -2664433 bp Feature: gene Location: 2666668-2669094 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 2667037-2667532 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 2667037-2667532 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 2667832-2668399 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 2667832-2668399 bp Feature: gene Location: 2669101-2670576 bp Feature: domain Description: HsdM Location: 2669107-2670568 bp Feature: domain Description: HsdM Location: 26691 07-2670568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), RVT-UG5, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286)

Seq: CAADHN010000001.1 (230808 bp)
Overview 1 RT 1: 47320-51215 bp 2 RT 2: 169944-173368 bp Neighborhood of RT #1 [47320, 51235] HMA HMA CzcD PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [169944, 173388] DUF2158 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 47320-48612 bp Feature: domain Description: HMA Location: 47611-47782 bp Feature: domain Description: HMA Location: 47611-47782 bp Feature: domain Description: HMA Location: 47839-48016 bp Feature: domain Description: HMA Location: 47839-48016 bp Feature: domain Description: CzcD Location: 48073-48601 bp Feature: domain Description: CzcD Location: 48073-48601 bp Feature: gene Location: 48739-49236 bp Feature: domain Description: PHA02517 Location: 48766-49216 bp Feature: domain Description: PHA02 517 Location: 48766-492 16 bp Feature: gene Location: 49289-50530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49487-50144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49487-50144 bp Feature: domain Description: GIIM Note: maturase Location: 50222-50453 bp Feature: domain Description: GIIM Note: maturase Location: 502 2 2 -50453 bp Feature: gene Location: 50537-50701 bp Feature: gene Location: 51023-51235 bp Feature: domain Description: PHA02517 Location: 51044-51215 bp Feature: domain Description: PHA02 517 Location: 51044-512 15 bp Feature: gene Location: 169944-170135 bp Feature: domain Description: DUF2158 Location: 169962-170085 bp Feature: domain Description: DUF2 158 Location: 169962 -170085 bp Feature: gene Location: 170652-171164 bp Feature: domain Description: PHA02517 Location: 170679-171144 bp Feature: domain Description: PHA02 517 Location: 170679-171144 bp Feature: gene Location: 171217-172458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171415-172072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171415-172 072 bp Feature: domain Description: GIIM Note: maturase Location: 172150-172381 bp Feature: domain Description: GIIM Note: maturase Location: 172 150-172 381 bp Feature: gene Location: 172465-172629 bp Feature: gene Location: 172951-173388 bp Feature: domain Description: PHA02517 Location: 173017-173368 bp Feature: domain Description: PHA02 517 Location: 173017-173368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), CzcD (COG1230), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DUF2158 (pfam09926)