myRT

myRT report for GCA_900706875.1_32018_B01

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Seq: CAADJI010000001.1 (4282478 bp)
Overview 1 RT 1: 432071-440253 bp 2 RT 2: 461621-466811 bp 3 RT 3: 3493788-3500923 bp Neighborhood of RT #1 [432071, 440261] COG3178 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [461621, 466822] EAL EAL RVT_N RVT-GII GIIM HNH COG3177 Neighborhood of RT #3 [3493788, 3501087] STN TonB-siderophor YHI9 RVT-UG2 PRK06333 HxlR Feature: gene Location: 432071-432259 bp Feature: domain Description: COG3178 Location: 432074-432245 bp Feature: domain Description: COG31 78 Location: 432074-432245 bp Feature: gene Location: 432259-433008 bp Feature: domain Description: COG3178 Location: 432277-432967 bp Feature: domain Description: COG31 78 Location: 432277-432967 bp Feature: gene Location: 434357-436069 bp Feature: domain Description: RVT_N Location: 434414-434657 bp Feature: domain Description: RVT_N Location: 43441 4-434657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434702-435335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434702-435335 bp Feature: domain Description: YkfC Location: 435548-435698 bp Feature: domain Description: YkfC Location: 435548-435698 bp Feature: domain Description: HNH Note: nucleases Location: 435875-436013 bp Feature: domain Description: HNH Note: nucleases Location: 435875-43601 3 bp Feature: gene Location: 436202-438988 bp Feature: domain Description: LptD Location: 436397-438974 bp Feature: domain Description: LptD Location: 436397-438974 bp Feature: gene Location: 439047-440261 bp Feature: domain Description: PRK10770 Location: 439059-440253 bp Feature: domain Description: PRK1 0770 Location: 439059-440253 bp Feature: gene Location: 461621-462043 bp Feature: domain Description: EAL Location: 461624-461987 bp Feature: domain Description: EAL Location: 461 624-461 987 bp Feature: gene Location: 462028-462210 bp Feature: domain Description: EAL Location: 462034-462172 bp Feature: domain Description: EAL Location: 462034-4621 72 bp Feature: gene Location: 463167-464975 bp Feature: domain Description: RVT_N Location: 463377-463587 bp Feature: domain Description: RVT_N Location: 463377-463587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463635-464271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463635-464271 bp Feature: domain Description: GIIM Note: maturase Location: 464325-464556 bp Feature: domain Description: GIIM Note: maturase Location: 464325-464556 bp Feature: domain Description: HNH Note: nucleases Location: 464808-464946 bp Feature: domain Description: HNH Note: nucleases Location: 464808-464946 bp Feature: gene Location: 465278-465439 bp Feature: gene Location: 465701-466822 bp Feature: domain Description: COG3177 Location: 465719-466811 bp Feature: domain Description: COG31 77 Location: 46571 9-46681 1 bp Feature: gene Location: 3493788-3496190 bp Feature: domain Description: STN Location: 3493908-3494061 bp Feature: domain Description: STN Location: 3493908-3494061 bp Feature: domain Description: TonB-siderophor Location: 3494169-3496128 bp Feature: domain Description: TonB-siderophor Location: 34941 69-34961 28 bp Feature: gene Location: 3496350-3497186 bp Feature: domain Description: YHI9 Location: 3496362-3497178 bp Feature: domain Description: YHI9 Location: 3496362-34971 78 bp Feature: gene Location: 3497358-3498497 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3497400-3498186 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3497400-34981 86 bp Feature: gene Location: 3499204-3500472 bp Feature: domain Description: PRK06333 Location: 3499210-3500467 bp Feature: domain Description: PRK06333 Location: 349921 0-3500467 bp Feature: gene Location: 3500581-3501087 bp Feature: domain Description: HxlR Location: 3500605-3500923 bp Feature: domain Description: HxlR Location: 3500605-3500923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), EAL (smart00052), GIIM (pfam08388), COG3177 (Fic family protein )
STN (smart00965), TonB-siderophor (TIGR01783), YHI9 (COG0384), RVT-UG2, PRK06333 (beta-ketoacyl-ACP synthase), HxlR (pfam01638)

Seq: CAADJI010000002.1 (2543486 bp)
Overview 1 RT 1: 2431194-2440457 bp Neighborhood of RT #1 [2431194, 2440729] HTH_32 rve RVT_N RVT-GII YkfC HNH HTH_Tnp_1 PHA02517 AAA_22 Feature: gene Location: 2431194-2432129 bp Feature: domain Description: HTH_32 Location: 2431302-2431521 bp Feature: domain Description: HTH_32 Location: 2 431302 -2 43152 1 bp Feature: domain Description: rve Location: 2431599-2431965 bp Feature: domain Description: rve Location: 2 431599-2 431965 bp Feature: gene Location: 2432557-2435958 bp Feature: gene Location: 2436005-2437717 bp Feature: domain Description: RVT_N Location: 2436062-2436305 bp Feature: domain Description: RVT_N Location: 2 436062 -2 436305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2436350-2436983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 436350-2 436983 bp Feature: domain Description: YkfC Location: 2437196-2437346 bp Feature: domain Description: YkfC Location: 2 437196-2 437346 bp Feature: domain Description: HNH Note: nucleases Location: 2437523-2437661 bp Feature: domain Description: HNH Note: nucleases Location: 2 43752 3-2 437661 bp Feature: gene Location: 2438322-2439485 bp Feature: domain Description: HTH_Tnp_1 Location: 2438331-2438550 bp Feature: domain Description: HTH_Tnp_1 Location: 2 438331-2 438550 bp Feature: domain Description: PHA02517 Location: 2438682-2439459 bp Feature: domain Description: PHA02 517 Location: 2 438682 -2 439459 bp Feature: gene Location: 2439926-2440729 bp Feature: domain Description: AAA_22 Location: 2440187-2440457 bp Feature: domain Description: AAA_2 2 Location: 2 440187-2 440457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), AAA_22 (pfam13401)