myRT

myRT report for GCA_900707065.1_AND01-038

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Seq: CAADKA010000633.1 (1815 bp)
Overview 1 RT 1: 2-1637 bp Neighborhood of RT #1 [2, 1636] RVT_N RVT-GII YkfC HNH Feature: gene Location: 2-1636 bp Feature: domain Description: RVT_N Location: 59-302 bp Feature: domain Description: RVT_N Location: 59-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-983 bp Feature: domain Description: YkfC Location: 1190-1343 bp Feature: domain Description: YkfC Location: 1 1 90-1 343 bp Feature: domain Description: HNH Note: nucleases Location: 1520-1637 bp Feature: domain Description: HNH Note: nucleases Location: 1 520-1 637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844)

Seq: CAADKA010000080.1 (15121 bp)
Overview 1 RT 1: 11185-15016 bp Neighborhood of RT #1 [11185, 15120] COG4127 AlpA RVT-UG5 nitrilase Feature: gene Location: 11185-12177 bp Feature: domain Description: COG4127 Location: 11191-12166 bp Feature: domain Description: COG412 7 Location: 11191-12 166 bp Feature: gene Location: 12182-12394 bp Feature: domain Description: AlpA Location: 12185-12356 bp Feature: domain Description: AlpA Location: 12 185-12 356 bp Feature: gene Location: 12547-15120 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12577-13072 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 577-13072 bp Feature: domain Description: nitrilase Location: 14434-15016 bp Feature: domain Description: nitrilase Location: 14434-15016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), AlpA (COG3311), RVT-UG5, nitrilase (cl11424)

Seq: CAADKA010000038.1 (2601 bp)
Overview 1 RT 1: 293-2362 bp Neighborhood of RT #1 [293, 2409] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 293-421 bp Feature: gene Location: 691-2409 bp Feature: domain Description: RVT_N Location: 748-985 bp Feature: domain Description: RVT_N Location: 748-985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 6-1687 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1972 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1972 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-2362 bp Feature: domain Description: HNHc Note: nucleases Location: 2206-23 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CAADKA010000750.1 (1816 bp)
Overview 1 RT 1: 2-1637 bp Neighborhood of RT #1 [2, 1636] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2-1636 bp Feature: domain Description: RVT_N Location: 59-302 bp Feature: domain Description: RVT_N Location: 59-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 7-983 bp Feature: domain Description: GIIM Note: maturase Location: 1037-1268 bp Feature: domain Description: GIIM Note: maturase Location: 1037-1268 bp Feature: domain Description: HNHc Note: nucleases Location: 1472-1637 bp Feature: domain Description: HNHc Note: nucleases Location: 14 72-1637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)