myRT

myRT report for GCA_900707155.1_AND04-016

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Seq: CAADKJ010000882.1 (2418 bp)
Overview 1 RT 1: 14-2417 bp Neighborhood of RT #1 [14, 2417] TetR_C_28 RVT_N RVT-GII GIIM Feature: gene Location: 14-358 bp Feature: domain Description: TetR_C_28 Location: 47-326 bp Feature: domain Description: TetR_C_28 Location: 47-326 bp Feature: gene Location: 500-2005 bp Feature: domain Description: RVT_N Location: 581-806 bp Feature: domain Description: RVT_N Location: 581 -806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1 499 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1784 bp Feature: domain Description: GIIM Note: maturase Location: 1 550-1 784 bp Feature: gene Location: 2046-2417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_C_28 (pfam17937), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAADKJ010000652.1 (2122 bp)
Overview 1 RT 1: 2-1923 bp Neighborhood of RT #1 [2, 2021] RVT-GII GIIM Feature: gene Location: 2-349 bp Feature: gene Location: 753-2021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-162 3 bp Feature: domain Description: GIIM Note: maturase Location: 1701-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1701-192 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAADKJ010000139.1 (25165 bp)
Overview 1 RT 1: 10595-19432 bp Neighborhood of RT #1 [10595, 19461] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 10595-11809 bp Feature: domain Description: PRK10770 Location: 10607-11801 bp Feature: domain Description: PRK10770 Location: 10607-11801 bp Feature: gene Location: 11868-14657 bp Feature: domain Description: LptD Location: 12063-14643 bp Feature: domain Description: LptD Location: 12063 -14643 bp Feature: gene Location: 14790-16502 bp Feature: domain Description: RVT_N Location: 14847-15090 bp Feature: domain Description: RVT_N Location: 14847-15090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15135-15768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513 5-15768 bp Feature: domain Description: YkfC Location: 15981-16131 bp Feature: domain Description: YkfC Location: 15981-1613 1 bp Feature: domain Description: HNH Note: nucleases Location: 16308-16446 bp Feature: domain Description: HNH Note: nucleases Location: 163 08-16446 bp Feature: gene Location: 17774-18790 bp Feature: domain Description: COG3178 Location: 17777-18776 bp Feature: domain Description: COG3 178 Location: 17777-18776 bp Feature: gene Location: 18787-19461 bp Feature: domain Description: NTP_transferase_like_1 Location: 18793-19432 bp Feature: domain Description: NTP_transferase_like_1 Location: 18793 -1943 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: CAADKJ010000586.1 (7006 bp)
Overview 1 RT 1: 3558-6975 bp Neighborhood of RT #1 [3558, 7004] HxlR PRK06333 RVT-UG2 Feature: gene Location: 3558-4064 bp Feature: domain Description: HxlR Location: 3582-3900 bp Feature: domain Description: HxlR Location: 3582-3900 bp Feature: gene Location: 4173-5441 bp Feature: domain Description: PRK06333 Location: 4179-5436 bp Feature: domain Description: PRK06333 Location: 4 179-54 36 bp Feature: gene Location: 5940-7004 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6189-6975 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6189-6975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2