myRT

myRT report for GCA_900707875.1_CAT09-026

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Seq: CAADND010000036.1 (7670 bp)
Overview 1 RT 1: 3236-7150 bp Neighborhood of RT #1 [3236, 7257] Arabinose_bd HTH_ARAC RVT-GII GIIM PFLE_PFLC Feature: gene Location: 3236-4258 bp Feature: domain Description: Arabinose_bd Location: 3323-3878 bp Feature: domain Description: Arabinose_bd Location: 3323-3878 bp Feature: domain Description: HTH_ARAC Location: 4010-4241 bp Feature: domain Description: HTH_ARAC Location: 401 0-4241 bp Feature: gene Location: 4341-4505 bp Feature: gene Location: 4512-5894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4830-5445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4830-5445 bp Feature: domain Description: GIIM Note: maturase Location: 5499-5727 bp Feature: domain Description: GIIM Note: maturase Location: 5499-5727 bp Feature: gene Location: 5921-6076 bp Feature: gene Location: 6283-7257 bp Feature: domain Description: PFLE_PFLC Location: 6352-7150 bp Feature: domain Description: PFLE_PFLC Location: 6352-71 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arabinose_bd (pfam12625), HTH_ARAC (smart00342), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: CAADND010000512.1 (781 bp)
Overview 1 RT 1: 2-779 bp Neighborhood of RT #1 [2, 778] RVT_N RVT-GII Feature: gene Location: 2-778 bp Feature: domain Description: RVT_N Location: 8-179 bp Feature: domain Description: RVT_N Location: 8-179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224-779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 4-779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAADND010000912.1 (781 bp)
Overview 1 RT 1: 1-781 bp Neighborhood of RT #1 [1, 780] RVT_N RVT-GII Feature: gene Location: 1-780 bp Feature: domain Description: RVT_N Location: 7-175 bp Feature: domain Description: RVT_N Location: 7-175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223-781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223 -781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAADND010000511.1 (722 bp)
Overview 1 RT 1: 1-721 bp Neighborhood of RT #1 [1, 720] RVT-GII GIIM HNH Feature: gene Location: 1-720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -94 bp Feature: domain Description: GIIM Note: maturase Location: 145-379 bp Feature: domain Description: GIIM Note: maturase Location: 14 5-379 bp Feature: domain Description: HNH Note: nucleases Location: 631-721 bp Feature: domain Description: HNH Note: nucleases Location: 631-721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: CAADND010000056.1 (13721 bp)
Overview 1 RT 1: 3-2933 bp Neighborhood of RT #1 [3, 2933] RVT-GII GIIM Feature: gene Location: 3-191 bp Feature: gene Location: 754-2022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1624 bp Feature: domain Description: GIIM Note: maturase Location: 1702-1924 bp Feature: domain Description: GIIM Note: maturase Location: 1702-1924 bp Feature: gene Location: 2172-2570 bp Feature: gene Location: 2754-2933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAADND010000112.1 (8929 bp)
Overview 1 RT 1: 1-6958 bp Neighborhood of RT #1 [1, 7152] DUF262 YeeA RVT-UG5 AAA_21 AAA_21 Feature: gene Location: 1-657 bp Feature: domain Description: DUF262 Location: 49-448 bp Feature: domain Description: DUF26 2 Location: 49-448 bp Feature: gene Location: 661-2442 bp Feature: domain Description: YeeA Location: 1528-2308 bp Feature: domain Description: YeeA Location: 1528-2308 bp Feature: gene Location: 2439-5459 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2934-3405 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2934-3405 bp Feature: gene Location: 5456-6013 bp Feature: gene Location: 6013-7152 bp Feature: domain Description: AAA_21 Location: 6085-6154 bp Feature: domain Description: AAA_21 Location: 6 085-6 154 bp Feature: domain Description: AAA_21 Location: 6628-6958 bp Feature: domain Description: AAA_21 Location: 6 6 28-6 958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), YeeA (COG1002), RVT-UG5, AAA_21 (pfam13304)

Seq: CAADND010000890.1 (722 bp)
Overview 1 RT 1: 3-381 bp Neighborhood of RT #1 [3, 719] RVT-GII GIIM Feature: gene Location: 3-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-96 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-96 bp Feature: domain Description: GIIM Note: maturase Location: 150-381 bp Feature: domain Description: GIIM Note: maturase Location: 150-381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)