myRT

myRT report for GCA_900752295.1_ERS235585_39

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Seq: CAADUU010000032.1 (76932 bp)
Overview 1 RT 1: 25440-34437 bp Neighborhood of RT #1 [25440, 34445] Fap7 DUF2075 RVT-UG13 NTP-PPase_RS21-C6_like TnpV Feature: gene Location: 25440-30038 bp Feature: domain Description: Fap7 Location: 26304-26739 bp Feature: domain Description: Fap7 Location: 26304-26739 bp Feature: gene Location: 30099-31985 bp Feature: domain Description: DUF2075 Location: 30897-31935 bp Feature: domain Description: DUF2075 Location: 30897-31 935 bp Feature: gene Location: 31972-33297 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 32380-32851 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 32380-32851 bp Feature: gene Location: 33294-33608 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 33312-33546 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 3331 2-33546 bp Feature: gene Location: 34095-34445 bp Feature: domain Description: TnpV Location: 34110-34437 bp Feature: domain Description: TnpV Location: 341 1 0-34437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fap7 (COG1936), DUF2075 (pfam09848), RVT-UG13, NTP-PPase_RS21-C6_like (cd11537), TnpV (pfam14198)

Seq: CAADUU010000026.1 (26777 bp)
Overview 1 RT 1: 445-5428 bp Neighborhood of RT #1 [445, 5442] Avd_like RVT-DGRs rpmB DnaE Feature: gene Location: 445-576 bp Feature: gene Location: 717-1094 bp Feature: domain Description: Avd_like Location: 780-1080 bp Feature: domain Description: Avd_like Location: 780-1080 bp Feature: gene Location: 1078-2166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1288-1969 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 88-1969 bp Feature: gene Location: 2189-2386 bp Feature: domain Description: rpmB Location: 2201-2369 bp Feature: domain Description: rpmB Location: 2 2 01-2 369 bp Feature: gene Location: 2527-5442 bp Feature: domain Description: DnaE Location: 2530-5428 bp Feature: domain Description: DnaE Location: 2 530-542 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, rpmB (PRK00359), DnaE (COG0587)

Seq: CAADUU010000043.1 (38729 bp)
Overview 1 RT 1: 17396-22926 bp Neighborhood of RT #1 [17396, 23207] Flg_new Flg_new RVT-Retrons HD_3 HipB Feature: gene Location: 17396-18334 bp Feature: gene Location: 18350-19807 bp Feature: domain Description: Flg_new Location: 18758-18932 bp Feature: domain Description: Flg_new Location: 18758-1893 2 bp Feature: domain Description: Flg_new Location: 19022-19187 bp Feature: domain Description: Flg_new Location: 19022-19187 bp Feature: gene Location: 20302-21261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20446-21001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20446-21001 bp Feature: gene Location: 21362-22015 bp Feature: domain Description: HD_3 Location: 21404-21821 bp Feature: domain Description: HD_3 Location: 21404-21821 bp Feature: gene Location: 22650-23207 bp Feature: domain Description: HipB Location: 22683-22926 bp Feature: domain Description: HipB Location: 22683 -22926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flg_new (pfam09479), RVT-Retrons, HD_3 (pfam13023), HipB (COG1396)