myRT

myRT report for GCA_900752825.1_ERS396306_24

Download annotations/find similar RTs

Seq: CAADWV010000241.1 (29626 bp)
Overview 1 RT 1: 50-3322 bp Neighborhood of RT #1 [50, 3322] RVT-UG27 Feature: gene Location: 50-718 bp Feature: gene Location: 711-1973 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 903-1539 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 903-1 539 bp Feature: gene Location: 2296-2793 bp Feature: gene Location: 2843-3322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CAADWV010000152.1 (27274 bp)
Overview 1 RT 1: 1584-4138 bp Neighborhood of RT #1 [1584, 4138] phage_LysB RVT-DGRs Feature: gene Location: 1584-2120 bp Feature: domain Description: phage_LysB Location: 1677-1902 bp Feature: domain Description: phage_LysB Location: 1677-1902 bp Feature: gene Location: 2125-2508 bp Feature: gene Location: 2486-3520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2696-3308 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 696-3308 bp Feature: gene Location: 3640-3774 bp Feature: gene Location: 3779-4138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_LysB (TIGR03495), RVT-DGRs

Seq: CAADWV010000082.1 (4555 bp)
Overview 1 RT 1: 1440-4554 bp Neighborhood of RT #1 [1440, 4554] KOG4010 GIIM RVT_N RVT-GII Feature: gene Location: 1440-2396 bp Feature: domain Description: KOG4010 Location: 2199-2361 bp Feature: domain Description: KOG4010 Location: 2199-23 61 bp Feature: gene Location: 2528-3145 bp Feature: domain Description: GIIM Note: maturase Location: 2534-2753 bp Feature: domain Description: GIIM Note: maturase Location: 253 4-2753 bp Feature: gene Location: 3129-4196 bp Feature: domain Description: RVT_N Location: 3183-3426 bp Feature: domain Description: RVT_N Location: 3 183 -3 426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471-4119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 471-4119 bp Feature: gene Location: 4429-4554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4010 (KOG4010, Coiled-coil protein TPD52 ), GIIM (pfam08388), RVT_N (pfam13655), RVT-GII

Seq: CAADWV010000210.1 (6514 bp)
Overview 1 RT 1: 3-4266 bp Neighborhood of RT #1 [3, 4266] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-587 bp Feature: domain Description: Bac_Flav_CT_G Location: 6-576 bp Feature: domain Description: Bac_Flav_CT_G Location: 6-576 bp Feature: gene Location: 1156-2979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1420-2242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 20-224 2 bp Feature: domain Description: Intron_maturas2 Location: 2416-2668 bp Feature: domain Description: Intron_maturas2 Location: 24 16-2668 bp Feature: domain Description: HNHc Note: nucleases Location: 2770-2941 bp Feature: domain Description: HNHc Note: nucleases Location: 2770-294 1 bp Feature: gene Location: 3074-3235 bp Feature: gene Location: 3214-4266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAADWV010000179.1 (18186 bp)
Overview 1 RT 1: 2-3161 bp Neighborhood of RT #1 [2, 3172] RVT-GII PRK09077 Feature: gene Location: 2-187 bp Feature: gene Location: 403-1221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1216 bp Feature: gene Location: 1275-1466 bp Feature: gene Location: 1583-3172 bp Feature: domain Description: PRK09077 Location: 1592-3161 bp Feature: domain Description: PRK09077 Location: 15 92-3161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09077 (L-aspartate oxidase; Provisional)

Seq: CAADWV010000285.1 (1187 bp)
Overview 1 RT 1: 2-980 bp Neighborhood of RT #1 [2, 1186] RVT-DGRs Feature: gene Location: 2-1186 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 386-980 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 386 -980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs