myRT

myRT report for GCA_900753015.1_ERS396322_76

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Seq: CAADXM010000028.1 (1508 bp)
Overview 1 RT 1: 121-1168 bp Neighborhood of RT #1 [121, 1506] RVT-GII Feature: gene Location: 121-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-1168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-1 1 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAADXM010000105.1 (35187 bp)
Overview 1 RT 1: 23076-27808 bp Neighborhood of RT #1 [23076, 27813] PRK00347 NagC RVT-GII DDE_Tnp_1_6 PRK03739 Feature: gene Location: 23076-23792 bp Feature: domain Description: PRK00347 Location: 23097-23775 bp Feature: domain Description: PRK00347 Location: 2 3097-2 3775 bp Feature: gene Location: 23931-25163 bp Feature: domain Description: NagC Location: 24225-25116 bp Feature: domain Description: NagC Location: 2 42 2 5-2 5116 bp Feature: gene Location: 25291-25482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25303-25432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5303-2 5432 bp Feature: gene Location: 25707-25979 bp Feature: domain Description: DDE_Tnp_1_6 Location: 25713-25923 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2 5713-2 592 3 bp Feature: gene Location: 26152-27813 bp Feature: domain Description: PRK03739 Location: 26158-27808 bp Feature: domain Description: PRK03739 Location: 2 6158-2 7808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00347 (DNA/RNA nuclease SfsA), NagC (COG1940), RVT-GII, DDE_Tnp_1_6 (pfam13751), PRK03739 (2-isopropylmalate synthase; Validated)

Seq: CAADXM010000079.1 (14830 bp)
Overview 1 RT 1: 1252-8068 bp Neighborhood of RT #1 [1252, 8322] RVT-GII GIIM RVT-GII GIIM TauA AmyAc_bac2_AmyA Feature: gene Location: 1252-2028 bp Feature: gene Location: 2057-2260 bp Feature: gene Location: 2520-3938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877-3492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877-3 492 bp Feature: domain Description: GIIM Note: maturase Location: 3552-3777 bp Feature: domain Description: GIIM Note: maturase Location: 3 552-3 777 bp Feature: gene Location: 4493-5734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4697-5354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4697-53 54 bp Feature: domain Description: GIIM Note: maturase Location: 5435-5654 bp Feature: domain Description: GIIM Note: maturase Location: 543 5-5654 bp Feature: gene Location: 5947-6456 bp Feature: domain Description: TauA Location: 6043-6448 bp Feature: domain Description: TauA Location: 6043 -6448 bp Feature: gene Location: 6559-8322 bp Feature: domain Description: AmyAc_bac2_AmyA Location: 6817-8068 bp Feature: domain Description: AmyAc_bac2_AmyA Location: 6817-8068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TauA (COG4521), AmyAc_bac2_AmyA (cd11316)

Seq: CAADXM010000189.1 (25025 bp)
Overview 1 RT 1: 23489-25022 bp Neighborhood of RT #1 [23489, 25024] Phage_XkdX RVT-DGRs Feature: gene Location: 23489-23632 bp Feature: domain Description: Phage_XkdX Location: 23510-23627 bp Feature: domain Description: Phage_XkdX Location: 23510-23627 bp Feature: gene Location: 23629-24117 bp Feature: gene Location: 24329-25024 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24524-25022 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24 524 -25022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: CAADXM010000424.1 (10598 bp)
Overview 1 RT 1: 6089-8098 bp Neighborhood of RT #1 [6089, 8157] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 6089-6349 bp Feature: domain Description: PHA02517 Location: 6131-6347 bp Feature: domain Description: PHA025 17 Location: 6131-6347 bp Feature: gene Location: 6462-6671 bp Feature: domain Description: InsE Location: 6474-6660 bp Feature: domain Description: InsE Location: 6474-6660 bp Feature: gene Location: 6714-7043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6879-6969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6879-6969 bp Feature: gene Location: 7216-7557 bp Feature: gene Location: 7855-8157 bp Feature: domain Description: trans_reg_C Location: 7903-8098 bp Feature: domain Description: trans_reg_C Location: 7903-8098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)

Seq: CAADXM010000233.1 (11773 bp)
Overview 1 RT 1: 3-4406 bp Neighborhood of RT #1 [3, 4651] RVT-GII GIIM AAA-ATPase_like PDDEXK_9 RnaY Feature: gene Location: 3-182 bp Feature: gene Location: 332-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1277 bp Feature: domain Description: GIIM Note: maturase Location: 1337-1568 bp Feature: domain Description: GIIM Note: maturase Location: 1337-156 8 bp Feature: gene Location: 2274-4004 bp Feature: domain Description: AAA-ATPase_like Location: 2304-3195 bp Feature: domain Description: AAA-ATPase_like Location: 2304-3195 bp Feature: domain Description: PDDEXK_9 Location: 3675-3972 bp Feature: domain Description: PDDEXK_9 Location: 36 75-3972 bp Feature: gene Location: 4145-4651 bp Feature: domain Description: RnaY Location: 4226-4406 bp Feature: domain Description: RnaY Location: 4226 -4406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RnaY (COG1418)