myRT

myRT report for GCA_900753525.1_ERS396372_16

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Seq: CAADZJ010000203.1 (23035 bp)
Overview 1 RT 1: 997-9114 bp Neighborhood of RT #1 [997, 9176] PRK13928 recD_rel RVT-GII HNHc DUF4180 EPS_sugtrans Feature: gene Location: 997-2022 bp Feature: domain Description: PRK13928 Location: 1033-1996 bp Feature: domain Description: PRK1 3928 Location: 1 033-1 996 bp Feature: gene Location: 2081-4120 bp Feature: domain Description: recD_rel Location: 2096-4097 bp Feature: domain Description: recD_rel Location: 2096-4097 bp Feature: gene Location: 4791-6827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5265-6000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5265-6000 bp Feature: domain Description: HNHc Note: nucleases Location: 6552-6675 bp Feature: domain Description: HNHc Note: nucleases Location: 6552-6675 bp Feature: gene Location: 7021-7425 bp Feature: domain Description: DUF4180 Location: 7090-7417 bp Feature: domain Description: DUF41 80 Location: 7090-741 7 bp Feature: gene Location: 7800-9176 bp Feature: domain Description: EPS_sugtrans Location: 7926-9114 bp Feature: domain Description: EPS_sugtrans Location: 7926-91 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13928 (rod shape-determining protein Mbl; Provisional), recD_rel (TIGR01448), RVT-GII, HNHc (smart00507), DUF4180 (pfam13788), EPS_sugtrans (TIGR03025)

Seq: CAADZJ010000273.1 (32388 bp)
Overview 1 RT 1: 390-5271 bp Neighborhood of RT #1 [390, 5831] Cas2_I_II_III RVT-CRISPR cas1_HMARI TPR Feature: gene Location: 390-749 bp Feature: domain Description: Cas2_I_II_III Location: 498-723 bp Feature: domain Description: Cas2 _I_II_III Location: 498-72 3 bp Feature: gene Location: 767-2665 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 962-1577 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 962 -1577 bp Feature: domain Description: cas1_HMARI Location: 1682-2657 bp Feature: domain Description: cas1_HMARI Location: 1682 -2 657 bp Feature: gene Location: 2684-3547 bp Feature: gene Location: 3540-5831 bp Feature: domain Description: TPR Location: 4884-5271 bp Feature: domain Description: TPR Location: 4884-52 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), TPR (smart00028)