myRT

myRT report for GCA_900754325.1_ERS396469_13

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Seq: CAAECL010000125.1 (5216 bp)
Overview 1 RT 1: 1503-4617 bp Neighborhood of RT #1 [1503, 4685] Avd_like Fib_succ_major RVT-DGRs HU-HIG Feature: gene Location: 1503-1847 bp Feature: domain Description: Avd_like Location: 1527-1833 bp Feature: domain Description: Avd_like Location: 1 527-1 833 bp Feature: gene Location: 1957-2271 bp Feature: domain Description: Fib_succ_major Location: 2047-2224 bp Feature: domain Description: Fib_succ_major Location: 2047-2224 bp Feature: gene Location: 2271-3482 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2457-3189 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2457-31 89 bp Feature: gene Location: 3568-4056 bp Feature: gene Location: 4242-4685 bp Feature: domain Description: HU-HIG Location: 4245-4617 bp Feature: domain Description: HU-HIG Location: 4245-461 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Fib_succ_major (TIGR02145), RVT-DGRs, HU-HIG (pfam18291)

Seq: CAAECL010000154.1 (1425 bp)
Overview 1 RT 1: 1-1192 bp Neighborhood of RT #1 [1, 1350] RVT-GII GIIM Feature: gene Location: 1-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 89-907 bp Feature: domain Description: GIIM Note: maturase Location: 961-1192 bp Feature: domain Description: GIIM Note: maturase Location: 961-1192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAECL010000062.1 (2911 bp)
Overview 1 RT 1: 30-2843 bp Neighborhood of RT #1 [30, 2875] Avd_like RVT-DGRs Bac_DNA_binding Feature: gene Location: 30-518 bp Feature: gene Location: 515-859 bp Feature: domain Description: Avd_like Location: 539-845 bp Feature: domain Description: Avd_like Location: 53 9-845 bp Feature: gene Location: 1289-2491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1475-2207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1475-2207 bp Feature: gene Location: 2573-2875 bp Feature: domain Description: Bac_DNA_binding Location: 2576-2843 bp Feature: domain Description: Bac_DNA_binding Location: 2576-2843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Bac_DNA_binding (pfam00216)

Seq: CAAECL010000300.1 (66681 bp)
Overview 1 RT 1: 3635-9912 bp Neighborhood of RT #1 [3635, 9926] RVT-UG24 dnaG Feature: gene Location: 3635-4252 bp Feature: gene Location: 4347-4625 bp Feature: gene Location: 4758-8183 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 5271-5736 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 5271-5736 bp Feature: gene Location: 8203-8880 bp Feature: gene Location: 8886-9926 bp Feature: domain Description: dnaG Location: 8970-9912 bp Feature: domain Description: dnaG Location: 8970-9912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, dnaG (TIGR01391)

Seq: CAAECL010000053.1 (1227 bp)
Overview 1 RT 1: 104-1220 bp Neighborhood of RT #1 [104, 1225] RVT-GII Feature: gene Location: 104-241 bp Feature: gene Location: 329-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAECL010000297.1 (2598 bp)
Overview 1 RT 1: 191-2448 bp Neighborhood of RT #1 [191, 2448] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 191-1999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1277 bp Feature: domain Description: Intron_maturas2 Location: 1403-1658 bp Feature: domain Description: Intron_maturas2 Location: 1403-16 58 bp Feature: domain Description: HNHc Note: nucleases Location: 1832-1973 bp Feature: domain Description: HNHc Note: nucleases Location: 1832-1973 bp Feature: gene Location: 2299-2448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAECL010000043.1 (1878 bp)
Overview 1 RT 1: 3-1575 bp Neighborhood of RT #1 [3, 1604] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-164 bp Feature: gene Location: 441-1604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 672-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67 2-867 bp Feature: domain Description: Intron_maturas2 Location: 939-1254 bp Feature: domain Description: Intron_maturas2 Location: 939-1254 bp Feature: domain Description: HNHc Note: nucleases Location: 1401-1575 bp Feature: domain Description: HNHc Note: nucleases Location: 1401-157 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAECL010000306.1 (1412 bp)
Overview 1 RT 1: 2-1193 bp Neighborhood of RT #1 [2, 1411] RVT-GII Intron_maturas2 Feature: gene Location: 2-1411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-8 15 bp Feature: domain Description: Intron_maturas2 Location: 959-1193 bp Feature: domain Description: Intron_maturas2 Location: 959-1193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)