myRT

myRT report for GCA_900754335.1_ERS396471_49

Download annotations/find similar RTs

Seq: CAAECM010000172.1 (28838 bp)
Overview 1 RT 1: 1-2534 bp Neighborhood of RT #1 [1, 2534] RVT-UG27 Feature: gene Location: 1-1185 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 115-751 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 1 5-751 bp Feature: gene Location: 1508-2005 bp Feature: gene Location: 2055-2534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CAAECM010000122.1 (3335 bp)
Overview 1 RT 1: 2-3324 bp Neighborhood of RT #1 [2, 3332] DUF3876 RVT-GII Intron_maturas2 HNHc RVT-GII Bac_Flav_CT_G Feature: gene Location: 2-343 bp Feature: domain Description: DUF3876 Location: 89-344 bp Feature: domain Description: DUF3876 Location: 89-344 bp Feature: gene Location: 595-1593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-853 bp Feature: domain Description: Intron_maturas2 Location: 1030-1231 bp Feature: domain Description: Intron_maturas2 Location: 1030-12 31 bp Feature: domain Description: HNHc Note: nucleases Location: 1384-1555 bp Feature: domain Description: HNHc Note: nucleases Location: 1384-1555 bp Feature: gene Location: 1634-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2 333 bp Feature: gene Location: 2522-2812 bp Feature: gene Location: 2967-3332 bp Feature: domain Description: Bac_Flav_CT_G Location: 2970-3324 bp Feature: domain Description: Bac_Flav_CT_G Location: 2 970-332 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)

Seq: CAAECM010000203.1 (1691 bp)
Overview 1 RT 1: 2-1613 bp Neighborhood of RT #1 [2, 1613] RVT-DGRs Feature: gene Location: 2-1012 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 212-824 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 212-824 bp Feature: gene Location: 1269-1613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs