myRT

myRT report for GCA_900756075.1_ERS473330_75

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Seq: CAAEIU010000017.1 (140160 bp)
Overview 1 RT 1: 106725-115086 bp Neighborhood of RT #1 [106725, 115178] AbiJ_NTD4 RVT-UG12 COG0610 Feature: gene Location: 106725-107477 bp Feature: gene Location: 107569-108417 bp Feature: domain Description: AbiJ_NTD4 Location: 107575-108019 bp Feature: domain Description: AbiJ_NTD4 Location: 1 07575-1 0801 9 bp Feature: gene Location: 108420-110108 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 108801-109209 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 08801 -1 09209 bp Feature: gene Location: 110149-112053 bp Feature: gene Location: 112053-115178 bp Feature: domain Description: COG0610 Location: 112158-115086 bp Feature: domain Description: COG061 0 Location: 1 1 21 58-1 1 5086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiJ_NTD4 (pfam18863), RVT-UG12, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )

Seq: CAAEIU010000025.1 (3027 bp)
Overview 1 RT 1: 65-2964 bp Neighborhood of RT #1 [65, 2964] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 65-1873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 9-1151 bp Feature: domain Description: Intron_maturas2 Location: 1247-1526 bp Feature: domain Description: Intron_maturas2 Location: 12 47-152 6 bp Feature: domain Description: HNHc Note: nucleases Location: 1703-1850 bp Feature: domain Description: HNHc Note: nucleases Location: 1703-1850 bp Feature: gene Location: 2155-2301 bp Feature: gene Location: 2401-2964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAEIU010000016.1 (89527 bp)
Overview 1 RT 1: 24540-35413 bp Neighborhood of RT #1 [24540, 35427] COG4646 HELICc RVT-GII Intron_maturas2 HNHc LPD25 N6_Mtase COG4646 Feature: gene Location: 24540-24866 bp Feature: gene Location: 24942-26783 bp Feature: domain Description: COG4646 Location: 25053-25473 bp Feature: domain Description: COG4646 Location: 25053 -25473 bp Feature: domain Description: HELICc Location: 25518-25884 bp Feature: domain Description: HELICc Location: 25518-25884 bp Feature: gene Location: 26780-28594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27050-27863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27050-27863 bp Feature: domain Description: Intron_maturas2 Location: 27932-28262 bp Feature: domain Description: Intron_maturas2 Location: 2793 2-28262 bp Feature: domain Description: HNHc Note: nucleases Location: 28412-28559 bp Feature: domain Description: HNHc Note: nucleases Location: 28412-28559 bp Feature: gene Location: 28804-29088 bp Feature: gene Location: 29170-35427 bp Feature: domain Description: LPD25 Location: 31387-31702 bp Feature: domain Description: LPD25 Location: 3 13 87-3 1702 bp Feature: domain Description: N6_Mtase Location: 32644-33211 bp Feature: domain Description: N6_Mtase Location: 3 2644-3 3 211 bp Feature: domain Description: COG4646 Location: 33274-35413 bp Feature: domain Description: COG4646 Location: 3 3 274-3 5413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LPD25 (pfam18840), N6_Mtase (pfam02384)

Seq: CAAEIU010000021.1 (69414 bp)
Overview 1 RT 1: 21248-26823 bp Neighborhood of RT #1 [21248, 27059] CcmA ABC2_membrane RVT-GII CBM_4_9 CBM_4_9 CBM_4_9 CBM_4_9 CBM_4_9 CBM_4_9 Feature: gene Location: 21248-22162 bp Feature: domain Description: CcmA Location: 21251-21998 bp Feature: domain Description: CcmA Location: 21251-21998 bp Feature: gene Location: 22174-23055 bp Feature: domain Description: ABC2_membrane Location: 22180-22846 bp Feature: domain Description: ABC2_membrane Location: 22180-2284 6 bp Feature: gene Location: 23304-23588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23340-23496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334 0-234 96 bp Feature: gene Location: 23653-23832 bp Feature: gene Location: 23841-27059 bp Feature: domain Description: CBM_4_9 Location: 24054-24426 bp Feature: domain Description: CBM_4 _9 Location: 24 054 -24 4 26 bp Feature: domain Description: CBM_4_9 Location: 24711-24930 bp Feature: domain Description: CBM_4 _9 Location: 24 711-24 930 bp Feature: domain Description: CBM_4_9 Location: 24981-25341 bp Feature: domain Description: CBM_4 _9 Location: 24 981-2534 1 bp Feature: domain Description: CBM_4_9 Location: 25416-25653 bp Feature: domain Description: CBM_4 _9 Location: 254 16-25653 bp Feature: domain Description: CBM_4_9 Location: 25935-26304 bp Feature: domain Description: CBM_4 _9 Location: 25935-26304 bp Feature: domain Description: CBM_4_9 Location: 26475-26823 bp Feature: domain Description: CBM_4 _9 Location: 264 75-26823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), ABC2_membrane (pfam01061), RVT-GII, CBM_4_9 (pfam02018)