myRT

myRT report for GCA_900756595.1_ERS537209_57

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Seq: CAAEKT010000143.1 (2598 bp)
Overview 1 RT 1: 3-2596 bp Neighborhood of RT #1 [3, 2596] RVT-UNC Feature: gene Location: 3-164 bp Feature: gene Location: 302-610 bp Feature: gene Location: 676-2220 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1114-1534 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 1 1 4-1 534 bp Feature: gene Location: 2345-2596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK/RVT-UG15/RVT-UG12/RVT-UG7(RVT-UNC)

Seq: CAAEKT010000357.1 (5609 bp)
Overview 1 RT 1: 205-3324 bp Neighborhood of RT #1 [205, 3377] RVT-GII GIIM thioredoxin IscR Feature: gene Location: 205-432 bp Feature: gene Location: 709-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1702-1924 bp Feature: domain Description: GIIM Note: maturase Location: 1702 -192 4 bp Feature: gene Location: 2620-2928 bp Feature: domain Description: thioredoxin Location: 2641-2923 bp Feature: domain Description: thioredoxin Location: 2 641-2 92 3 bp Feature: gene Location: 2919-3377 bp Feature: domain Description: IscR Location: 2922-3324 bp Feature: domain Description: IscR Location: 2 92 2 -332 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), thioredoxin (TIGR01068), IscR (TIGR02010)

Seq: CAAEKT010000256.1 (3327 bp)
Overview 1 RT 1: 439-3136 bp Neighborhood of RT #1 [439, 3147] RVT-GII Feature: gene Location: 439-1881 bp Feature: gene Location: 2016-2195 bp Feature: gene Location: 2551-3147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2752-3136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2752-3 13 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAAEKT010000066.1 (14526 bp)
Overview 1 RT 1: 2-2426 bp Neighborhood of RT #1 [2, 2428] rSAM_mob_pairB RVT-GII BaeS NosY Feature: gene Location: 2-247 bp Feature: domain Description: rSAM_mob_pairB Location: 5-221 bp Feature: domain Description: rSAM_mob_pairB Location: 5-221 bp Feature: gene Location: 369-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-4 71 bp Feature: gene Location: 704-1612 bp Feature: domain Description: BaeS Location: 725-1553 bp Feature: domain Description: BaeS Location: 725-1553 bp Feature: gene Location: 1616-2428 bp Feature: domain Description: NosY Location: 1625-2426 bp Feature: domain Description: NosY Location: 1625-24 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rSAM_mob_pairB (TIGR04470), RVT-GII, BaeS (COG0642), NosY (COG1277)

Seq: CAAEKT010000023.1 (3436 bp)
Overview 1 RT 1: 3-3434 bp Neighborhood of RT #1 [3, 3434] T4SS-DNA_transf RVT-GII Feature: gene Location: 3-701 bp Feature: domain Description: T4SS-DNA_transf Location: 516-639 bp Feature: domain Description: T4SS-DNA_transf Location: 5 16-639 bp Feature: gene Location: 1442-3247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1700-2417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1700-2417 bp Feature: gene Location: 3261-3434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII

Seq: CAAEKT010000014.1 (4781 bp)
Overview 1 RT 1: 585-4760 bp Neighborhood of RT #1 [585, 4780] HATPase_AgrC-ComD-like LytT RVT-GII GIIM PHA02517 InsE Feature: gene Location: 585-1877 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 1479-1869 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 1479-186 9 bp Feature: gene Location: 1886-2629 bp Feature: domain Description: LytT Location: 1898-2606 bp Feature: domain Description: LytT Location: 1898-26 06 bp Feature: gene Location: 2812-3507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815-3022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815-3022 bp Feature: domain Description: GIIM Note: maturase Location: 3076-3292 bp Feature: domain Description: GIIM Note: maturase Location: 3076 -3292 bp Feature: gene Location: 3594-4508 bp Feature: domain Description: PHA02517 Location: 3690-4488 bp Feature: domain Description: PHA02517 Location: 36 90-4488 bp Feature: gene Location: 4505-4780 bp Feature: domain Description: InsE Location: 4511-4760 bp Feature: domain Description: InsE Location: 4511-476 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_AgrC-ComD-like (cd16935), LytT (COG3279), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)