myRT

myRT report for GCA_900756825.1_ERS537244_8

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Seq: CAAELO010000341.1 (29500 bp)
Overview 1 RT 1: 2840-9630 bp Neighborhood of RT #1 [2840, 9650] Upp Upp RVT-UG24 dnaG Feature: gene Location: 2840-3535 bp Feature: domain Description: Upp Location: 2870-2996 bp Feature: domain Description: Upp Location: 2870-2996 bp Feature: domain Description: Upp Location: 3161-3434 bp Feature: domain Description: Upp Location: 31 61 -3434 bp Feature: gene Location: 3548-4354 bp Feature: gene Location: 4495-7914 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 5062-5545 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 5062-5545 bp Feature: gene Location: 7907-8620 bp Feature: gene Location: 8601-9650 bp Feature: domain Description: dnaG Location: 8688-9630 bp Feature: domain Description: dnaG Location: 8688-9630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Upp (COG0035), RVT-UG24, dnaG (TIGR01391)

Seq: CAAELO010000285.1 (46949 bp)
Overview 1 RT 1: 10020-15388 bp Neighborhood of RT #1 [10020, 15388] RVT-DGRs Feature: gene Location: 10020-10268 bp Feature: gene Location: 10359-10760 bp Feature: gene Location: 10767-12338 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10980-11715 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10980-11715 bp Feature: gene Location: 12944-14380 bp Feature: gene Location: 14393-15388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAELO010000421.1 (3369 bp)
Overview 1 RT 1: 2-3364 bp Neighborhood of RT #1 [2, 3366] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 2-343 bp Feature: domain Description: Bac_Flav_CT_G Location: 5-326 bp Feature: domain Description: Bac_Flav_CT_G Location: 5-3 26 bp Feature: gene Location: 893-2704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157-1979 bp Feature: domain Description: Intron_maturas2 Location: 2048-2405 bp Feature: domain Description: Intron_maturas2 Location: 2048-2405 bp Feature: domain Description: HNHc Note: nucleases Location: 2528-2675 bp Feature: domain Description: HNHc Note: nucleases Location: 2528-2675 bp Feature: gene Location: 2785-3366 bp Feature: domain Description: Bac_Flav_CT_G Location: 2821-3364 bp Feature: domain Description: Bac_Flav_CT_G Location: 2821-3 3 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CAAELO010000267.1 (7829 bp)
Overview 1 RT 1: 1064-6458 bp Neighborhood of RT #1 [1064, 6458] XerC RVT-DGRs Feature: gene Location: 1064-2248 bp Feature: domain Description: XerC Location: 1469-2225 bp Feature: domain Description: XerC Location: 14 69-2225 bp Feature: gene Location: 2463-2855 bp Feature: gene Location: 2858-4429 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3068-3809 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3068-3809 bp Feature: gene Location: 4469-4759 bp Feature: gene Location: 4983-6458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-DGRs

Seq: CAAELO010000377.1 (3597 bp)
Overview 1 RT 1: 151-3457 bp Neighborhood of RT #1 [151, 3457] DUF4145 RVT-Retrons Feature: gene Location: 151-384 bp Feature: gene Location: 509-1141 bp Feature: domain Description: DUF4145 Location: 770-1013 bp Feature: domain Description: DUF4145 Location: 770-1013 bp Feature: gene Location: 1148-2194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1382-1919 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1382-1919 bp Feature: gene Location: 2394-2765 bp Feature: gene Location: 2768-3457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4145 (pfam13643), RVT-Retrons