myRT

myRT report for GCA_900758335.1_ERS608501_23

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Seq: CAAERG010000143.1 (70945 bp)
Overview 1 RT 1: 7923-11832 bp Neighborhood of RT #1 [7923, 11832] COG1373 RVT-GII GIIM Feature: gene Location: 7923-8066 bp Feature: gene Location: 8089-9321 bp Feature: domain Description: COG1373 Location: 8110-9307 bp Feature: domain Description: COG1 373 Location: 81 1 0-9307 bp Feature: gene Location: 9419-10807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9752-10445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9752-1 0445 bp Feature: domain Description: GIIM Note: maturase Location: 10508-10718 bp Feature: domain Description: GIIM Note: maturase Location: 1 0508-1 071 8 bp Feature: gene Location: 10834-11190 bp Feature: gene Location: 11380-11832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, GIIM (pfam08388)

Seq: CAAERG010000038.1 (65202 bp)
Overview 1 RT 1: 63187-65089 bp Neighborhood of RT #1 [63187, 65148] Cytidylate_kin2 RVT-GII Feature: gene Location: 63187-63840 bp Feature: domain Description: Cytidylate_kin2 Location: 63199-63739 bp Feature: domain Description: Cytidylate_kin2 Location: 63199-63739 bp Feature: gene Location: 63910-64272 bp Feature: gene Location: 64354-65148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64702-65089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64702 -65089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytidylate_kin2 (pfam13189), RVT-GII

Seq: CAAERG010000059.1 (13548 bp)
Overview 1 RT 1: 9996-13184 bp Neighborhood of RT #1 [9996, 13294] DUF3848 DUF3849 KOG1000 RVT-GII HNHc Feature: gene Location: 9996-10802 bp Feature: domain Description: DUF3848 Location: 10014-10293 bp Feature: domain Description: DUF3 848 Location: 10014-10293 bp Feature: domain Description: DUF3849 Location: 10329-10707 bp Feature: domain Description: DUF3 849 Location: 103 29-10707 bp Feature: gene Location: 10804-12171 bp Feature: domain Description: KOG1000 Location: 11164-11368 bp Feature: domain Description: KOG1000 Location: 11164-113 68 bp Feature: gene Location: 12248-13294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12254-12437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12254-1243 7 bp Feature: domain Description: HNHc Note: nucleases Location: 13016-13184 bp Feature: domain Description: HNHc Note: nucleases Location: 13 016-13 184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3848 (pfam12959), DUF3849 (pfam12960), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, HNHc (smart00507)

Seq: CAAERG010000077.1 (11296 bp)
Overview 1 RT 1: 125-3175 bp Neighborhood of RT #1 [125, 3252] RVT-GII GIIM Lon PRK13746 Feature: gene Location: 125-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128-338 bp Feature: domain Description: GIIM Note: maturase Location: 392-611 bp Feature: domain Description: GIIM Note: maturase Location: 392-611 bp Feature: gene Location: 1004-2488 bp Feature: domain Description: Lon Location: 1535-2471 bp Feature: domain Description: Lon Location: 1535-24 71 bp Feature: gene Location: 2485-3252 bp Feature: domain Description: PRK13746 Location: 2491-3175 bp Feature: domain Description: PRK1374 6 Location: 24 91-3175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Lon (COG0466), PRK13746 (aminoglycoside resistance protein; Provisional)

Seq: CAAERG010000064.1 (5144 bp)
Overview 1 RT 1: 2386-5057 bp Neighborhood of RT #1 [2386, 5113] T4SS-DNA_transf RVT-GII Feature: gene Location: 2386-3633 bp Feature: domain Description: T4SS-DNA_transf Location: 2788-3616 bp Feature: domain Description: T4SS-DNA_transf Location: 2788-3616 bp Feature: gene Location: 3930-4169 bp Feature: gene Location: 4361-5113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676-5057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676-5 05 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII