myRT

myRT report for GCA_900759275.1_ERS608584_12

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Seq: CAAEUS010000098.1 TPA_asm: uncultured Intestinibacter sp. isolate HGM13554 genome assembly, contig: ERS608584_12_k95_42513, whole genome shotgun sequence (5020 bp)
Overview 1 RT 1: 2873-4627 bp Neighborhood of RT #1 [2873, 5019] Fer2_BFD Fer2_BFD RVT-Retrons Feature: gene Location: 2873-3181 bp Feature: domain Description: Fer2_BFD Location: 2903-2966 bp Feature: domain Description: Fer2_BFD Location: 2903-2966 bp Feature: domain Description: Fer2_BFD Location: 3029-3152 bp Feature: domain Description: Fer2_BFD Location: 3029-31 52 bp Feature: gene Location: 3417-3599 bp Feature: gene Location: 4066-5019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4087-4627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4087-4627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fer2_BFD (pfam04324), RVT-Retrons

Seq: CAAEUS010000144.1 TPA_asm: uncultured Intestinibacter sp. isolate HGM13554 genome assembly, contig: ERS608584_12_k95_73729, whole genome shotgun sequence (17875 bp)
Overview 1 RT 1: 11771-17577 bp Neighborhood of RT #1 [11771, 17696] PLDc_N_DEXD_a DEXDc_RapA PRK04914 RVT-UG2 VOC_like Feature: gene Location: 11771-14476 bp Feature: domain Description: PLDc_N_DEXD_a Location: 11783-12302 bp Feature: domain Description: PLDc_N_DEXD_a Location: 11783-12 302 bp Feature: domain Description: DEXDc_RapA Location: 12464-13151 bp Feature: domain Description: DEXDc_RapA Location: 12 464-13151 bp Feature: domain Description: PRK04914 Location: 14024-14246 bp Feature: domain Description: PRK04914 Location: 1402 4-142 46 bp Feature: gene Location: 14534-15589 bp Feature: gene Location: 15707-16564 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15710-16232 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15710-162 32 bp Feature: gene Location: 17493-17696 bp Feature: domain Description: VOC_like Location: 17502-17577 bp Feature: domain Description: VOC_like Location: 17502 -17577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_a (cd09179), DEXDc_RapA (cd18011), PRK04914 (RNA polymerase-associated protein RapA), RVT-UG2, VOC_like (cd16355)