myRT

myRT report for GCA_900759285.1_ERS608592_26

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Seq: CAAEVJ010000029.1 (7723 bp)
Overview 1 RT 1: 346-4437 bp Neighborhood of RT #1 [346, 4466] DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 346-573 bp Feature: domain Description: DUF4141 Location: 361-514 bp Feature: domain Description: DUF41 41 Location: 361 -51 4 bp Feature: gene Location: 613-774 bp Feature: gene Location: 1094-2929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388-2210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 388-221 0 bp Feature: domain Description: Intron_maturas2 Location: 2369-2738 bp Feature: domain Description: Intron_maturas2 Location: 2369-2738 bp Feature: domain Description: HNHc Note: nucleases Location: 2762-2903 bp Feature: domain Description: HNHc Note: nucleases Location: 2762-2903 bp Feature: gene Location: 2922-3458 bp Feature: gene Location: 3462-4466 bp Feature: domain Description: Bac_Flav_CT_J Location: 3471-4437 bp Feature: domain Description: Bac_Flav_CT_J Location: 3471 -4437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: CAAEVJ010000137.1 (26304 bp)
Overview 1 RT 1: 11662-15899 bp Neighborhood of RT #1 [11662, 15976] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 COG3943 Feature: gene Location: 11662-11859 bp Feature: gene Location: 11875-13044 bp Feature: domain Description: Arm-DNA-bind_5 Location: 11902-12160 bp Feature: domain Description: Arm-DNA-bind_5 Location: 11902 -12 160 bp Feature: domain Description: Phage_int_SAM_5 Location: 12199-12520 bp Feature: domain Description: Phage_int_SAM_5 Location: 12 199-12 52 0 bp Feature: domain Description: INTN1_C_like Location: 12559-13027 bp Feature: domain Description: INTN1_C_like Location: 12 559-1302 7 bp Feature: gene Location: 13591-15399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13855-14677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13855-14677 bp Feature: domain Description: Intron_maturas2 Location: 14788-15058 bp Feature: domain Description: Intron_maturas2 Location: 14788-15058 bp Feature: gene Location: 15401-15601 bp Feature: gene Location: 15614-15976 bp Feature: domain Description: COG3943 Location: 15656-15899 bp Feature: domain Description: COG3943 Location: 15656-15899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), COG3943 (Uncharacterized conserved protein )

Seq: CAAEVJ010000166.1 (4534 bp)
Overview 1 RT 1: 3-3179 bp Neighborhood of RT #1 [3, 3199] AdoMet_MTases RVT-GII Intron_maturas2 HNHc HsdM Feature: gene Location: 3-509 bp Feature: domain Description: AdoMet_MTases Location: 114-426 bp Feature: domain Description: AdoMet_MTases Location: 114-426 bp Feature: gene Location: 506-2314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1592 bp Feature: domain Description: Intron_maturas2 Location: 1667-2141 bp Feature: domain Description: Intron_maturas2 Location: 1667-2141 bp Feature: domain Description: HNHc Note: nucleases Location: 2141-2300 bp Feature: domain Description: HNHc Note: nucleases Location: 2141-23 00 bp Feature: gene Location: 2321-2584 bp Feature: gene Location: 2861-3199 bp Feature: domain Description: HsdM Location: 3044-3179 bp Feature: domain Description: HsdM Location: 3 044-3 179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HsdM (COG0286)

Seq: CAAEVJ010000139.1 (35409 bp)
Overview 1 RT 1: 5172-9105 bp Neighborhood of RT #1 [5172, 9105] RVT-UG27 Feature: gene Location: 5172-5819 bp Feature: gene Location: 5833-6501 bp Feature: gene Location: 6494-7756 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 6686-7322 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 6686-7322 bp Feature: gene Location: 8079-8576 bp Feature: gene Location: 8626-9105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CAAEVJ010000112.1 (220563 bp)
Overview 1 RT 1: 108642-112269 bp Neighborhood of RT #1 [108642, 112269] RVT-DGRs Feature: gene Location: 108642-110108 bp Feature: gene Location: 110148-110297 bp Feature: gene Location: 110456-111478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 110666-111263 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 110666-111263 bp Feature: gene Location: 111453-111839 bp Feature: gene Location: 111853-112269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAEVJ010000090.1 (28253 bp)
Overview 1 RT 1: 10696-13526 bp Neighborhood of RT #1 [10696, 13526] RVT-DGRs Feature: gene Location: 10696-10929 bp Feature: gene Location: 11127-11282 bp Feature: gene Location: 11308-12609 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11521-12118 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11521-12118 bp Feature: gene Location: 12609-13094 bp Feature: gene Location: 13284-13526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAEVJ010000149.1 (7628 bp)
Overview 1 RT 1: 1-4631 bp Neighborhood of RT #1 [1, 5092] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 1-1545 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-1531 bp Feature: domain Description: Bac_Flav_CT_G Location: 4-1531 bp Feature: gene Location: 1573-1746 bp Feature: gene Location: 2092-3903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356-3178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356-317 8 bp Feature: domain Description: Intron_maturas2 Location: 3253-3568 bp Feature: domain Description: Intron_maturas2 Location: 3253-3568 bp Feature: domain Description: HNHc Note: nucleases Location: 3724-3874 bp Feature: domain Description: HNHc Note: nucleases Location: 37 24-387 4 bp Feature: gene Location: 3981-4439 bp Feature: domain Description: Bac_Flav_CT_G Location: 3999-4425 bp Feature: domain Description: Bac_Flav_CT_G Location: 3999-4425 bp Feature: gene Location: 4460-5092 bp Feature: domain Description: DUF4141 Location: 4484-4631 bp Feature: domain Description: DUF4141 Location: 4484-4631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)