myRT

myRT report for GCA_900760155.1_SRS013638_6

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Seq: CAAEXY010000655.1 (42637 bp)
Overview 1 RT 1: 375-3123 bp Neighborhood of RT #1 [375, 3149] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 375-1868 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 819-1524 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81 9-1 524 bp Feature: gene Location: 1811-2191 bp Feature: domain Description: Avd_like Location: 1838-2144 bp Feature: domain Description: Avd_like Location: 1 838-21 44 bp Feature: gene Location: 2337-3149 bp Feature: domain Description: DUF1566 Location: 2871-3123 bp Feature: domain Description: DUF1 566 Location: 2871 -31 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEXY010000337.1 (21412 bp)
Overview 1 RT 1: 190-4720 bp Neighborhood of RT #1 [190, 4737] XerC RVT-DGRs Avd_like DUF1566 Feature: gene Location: 190-390 bp Feature: gene Location: 688-1869 bp Feature: domain Description: XerC Location: 934-1849 bp Feature: domain Description: XerC Location: 934-1849 bp Feature: gene Location: 1913-3232 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2099-2789 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 099-2 789 bp Feature: gene Location: 3499-3894 bp Feature: domain Description: Avd_like Location: 3535-3853 bp Feature: domain Description: Avd_like Location: 3535-3853 bp Feature: gene Location: 3970-4737 bp Feature: domain Description: DUF1566 Location: 4468-4720 bp Feature: domain Description: DUF1566 Location: 4468-472 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEXY010000448.1 (3133 bp)
Overview 1 RT 1: 186-2915 bp Neighborhood of RT #1 [186, 2917] RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 186-2003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450-1272 bp Feature: domain Description: Intron_maturas2 Location: 1347-1674 bp Feature: domain Description: Intron_maturas2 Location: 13 47-1674 bp Feature: domain Description: HNHc Note: nucleases Location: 1824-1977 bp Feature: domain Description: HNHc Note: nucleases Location: 1824-1977 bp Feature: gene Location: 2302-2520 bp Feature: gene Location: 2756-2917 bp Feature: domain Description: DUF4134 Location: 2774-2915 bp Feature: domain Description: DUF413 4 Location: 2774-2915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEXY010000203.1 (4816 bp)
Overview 1 RT 1: 2-1117 bp Neighborhood of RT #1 [2, 1117] RVT-GII DUF4134 Feature: gene Location: 2-355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-203 bp Feature: gene Location: 397-663 bp Feature: domain Description: DUF4134 Location: 448-646 bp Feature: domain Description: DUF4 134 Location: 4 4 8-64 6 bp Feature: gene Location: 644-1117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEXY010000160.1 (30448 bp)
Overview 1 RT 1: 14005-20304 bp 2 RT 2: 25855-29980 bp Neighborhood of RT #1 [14005, 20312] DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [25855, 30357] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM Feature: gene Location: 14005-14634 bp Feature: domain Description: DUF4141 Location: 14017-14173 bp Feature: domain Description: DUF4141 Location: 14017-14173 bp Feature: gene Location: 14682-15296 bp Feature: gene Location: 15545-17368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15809-16631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 809-16631 bp Feature: domain Description: Intron_maturas2 Location: 16805-17006 bp Feature: domain Description: Intron_maturas2 Location: 16805 -17006 bp Feature: domain Description: HNHc Note: nucleases Location: 17159-17330 bp Feature: domain Description: HNHc Note: nucleases Location: 1715 9-17330 bp Feature: gene Location: 17471-17761 bp Feature: gene Location: 17916-20312 bp Feature: domain Description: Bac_Flav_CT_G Location: 17919-20304 bp Feature: domain Description: Bac_Flav_CT_G Location: 17919-20304 bp Feature: gene Location: 25855-27111 bp Feature: domain Description: Relaxase Location: 26023-26341 bp Feature: domain Description: Relaxase Location: 26023-26341 bp Feature: domain Description: Relaxase Location: 26665-26902 bp Feature: domain Description: Relaxase Location: 26665 -26902 bp Feature: gene Location: 27145-28068 bp Feature: domain Description: YWFCY Location: 27151-27328 bp Feature: domain Description: YWFCY Location: 2715 1-27328 bp Feature: gene Location: 28705-30357 bp Feature: domain Description: RVT_N Location: 28759-29002 bp Feature: domain Description: RVT_N Location: 2875 9-29002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29047-29695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29047-29695 bp Feature: domain Description: GIIM Note: maturase Location: 29749-29980 bp Feature: domain Description: GIIM Note: maturase Location: 29749-29980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEXY010000522.1 (2445 bp)
Overview 1 RT 1: 2-1901 bp Neighborhood of RT #1 [2, 2443] RVT-GII Feature: gene Location: 2-217 bp Feature: gene Location: 367-687 bp Feature: gene Location: 845-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157-1901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157-1901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT