myRT

myRT report for GCA_900760335.1_SRS015190_37

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Seq: CAAEYQ010000203.1 (16013 bp)
Overview 1 RT 1: 10162-14596 bp Neighborhood of RT #1 [10162, 14596] RVT-DGRs Feature: gene Location: 10162-12192 bp Feature: gene Location: 12342-12560 bp Feature: gene Location: 12614-13903 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12824-13439 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2824-1 3439 bp Feature: gene Location: 13907-14263 bp Feature: gene Location: 14420-14596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAEYQ010000013.1 (62378 bp)
Overview 1 RT 1: 20999-24641 bp Neighborhood of RT #1 [20999, 24641] Phage_XkdX RVT-DGRs Feature: gene Location: 20999-21454 bp Feature: gene Location: 21481-21615 bp Feature: domain Description: Phage_XkdX Location: 21502-21604 bp Feature: domain Description: Phage_XkdX Location: 2 1502 -2 1604 bp Feature: gene Location: 21868-23013 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22078-22717 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 078-2 2 717 bp Feature: gene Location: 23132-23263 bp Feature: gene Location: 23373-24641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: CAAEYQ010000319.1 (84218 bp)
Overview 1 RT 1: 43268-48609 bp Neighborhood of RT #1 [43268, 52730] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 43268-43510 bp Feature: gene Location: 43690-44175 bp Feature: gene Location: 44172-45476 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 44385-44979 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 443 85-44979 bp Feature: gene Location: 45593-45796 bp Feature: gene Location: 45993-52730 bp Feature: domain Description: Laminin_G_3 Location: 47454-47532 bp Feature: domain Description: Laminin_G_3 Location: 47454-4753 2 bp Feature: domain Description: Laminin_G_3 Location: 48183-48609 bp Feature: domain Description: Laminin_G_3 Location: 48183 -48609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: CAAEYQ010000152.1 (13515 bp)
Overview 1 RT 1: 1928-5438 bp Neighborhood of RT #1 [1928, 6103] RVT-DGRs Phage_Mu_F Feature: gene Location: 1928-2170 bp Feature: gene Location: 2369-2854 bp Feature: gene Location: 2854-4155 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3067-3664 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3067-3664 bp Feature: gene Location: 4534-4767 bp Feature: gene Location: 4877-6103 bp Feature: domain Description: Phage_Mu_F Location: 5162-5438 bp Feature: domain Description: Phage_Mu_F Location: 5162-54 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_Mu_F (pfam04233)

Seq: CAAEYQ010000271.1 (65127 bp)
Overview 1 RT 1: 38954-42154 bp Neighborhood of RT #1 [38954, 42154] Gp49 HTH_XRE RVT-DGRs Feature: gene Location: 38954-39298 bp Feature: domain Description: Gp49 Location: 39008-39266 bp Feature: domain Description: Gp49 Location: 39008-39266 bp Feature: gene Location: 39303-39614 bp Feature: domain Description: HTH_XRE Location: 39417-39570 bp Feature: domain Description: HTH_XRE Location: 39417-395 70 bp Feature: gene Location: 39861-41351 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40254-40851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4025 4-4085 1 bp Feature: gene Location: 41419-41925 bp Feature: gene Location: 41909-42154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gp49 (pfam05973), HTH_XRE (smart00530), RVT-DGRs

Seq: CAAEYQ010000244.1 (15368 bp)
Overview 1 RT 1: 12774-15166 bp Neighborhood of RT #1 [12774, 15166] RVT-DGRs Feature: gene Location: 12774-13007 bp Feature: gene Location: 13029-13286 bp Feature: gene Location: 13383-14684 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13596-14193 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13596 -14193 bp Feature: gene Location: 14717-15166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CAAEYQ010000291.1 (4020 bp)
Overview 1 RT 1: 1-2941 bp Neighborhood of RT #1 [1, 2941] RVT-UG27 Feature: gene Location: 1-282 bp Feature: gene Location: 332-1597 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 521-1157 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 521-1157 bp Feature: gene Location: 1615-2241 bp Feature: gene Location: 2285-2941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CAAEYQ010000092.1 (36923 bp)
Overview 1 RT 1: 9096-12238 bp Neighborhood of RT #1 [9096, 12255] DUF4133 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 9096-9392 bp Feature: domain Description: DUF4133 Location: 9138-9315 bp Feature: domain Description: DUF4133 Location: 9138 -9315 bp Feature: gene Location: 9405-9599 bp Feature: domain Description: DUF4134 Location: 9495-9585 bp Feature: domain Description: DUF4134 Location: 9495-958 5 bp Feature: gene Location: 9624-11435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9888-10710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98 8 8 -10710 bp Feature: domain Description: Intron_maturas2 Location: 10899-11109 bp Feature: domain Description: Intron_maturas2 Location: 108 99-11109 bp Feature: domain Description: HNHc Note: nucleases Location: 11259-11364 bp Feature: domain Description: HNHc Note: nucleases Location: 11259-11364 bp Feature: gene Location: 11615-11965 bp Feature: gene Location: 11977-12255 bp Feature: domain Description: DUF4134 Location: 12037-12238 bp Feature: domain Description: DUF4134 Location: 12037-12238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)