myRT

myRT report for GCA_900760355.1_SRS015264_18

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Seq: CAAEYU010000013.1 (21573 bp)
Overview 1 RT 1: 84-1889 bp Neighborhood of RT #1 [84, 1889] RVT-GII GIIM Feature: gene Location: 84-1367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-909 bp Feature: domain Description: GIIM Note: maturase Location: 975-1194 bp Feature: domain Description: GIIM Note: maturase Location: 975-1 1 94 bp Feature: gene Location: 1354-1497 bp Feature: gene Location: 1572-1889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAAEYU010000235.1 (64910 bp)
Overview 1 RT 1: 23276-27623 bp Neighborhood of RT #1 [23276, 27700] TTRAP YodL LPD18 DUF4316 RVT-UG14 Sig-70_plancto1 RNA_pol_A_CTD Feature: gene Location: 23276-23527 bp Feature: domain Description: TTRAP Location: 23300-23474 bp Feature: domain Description: TTRAP Location: 2 3300-2 3474 bp Feature: gene Location: 23524-24447 bp Feature: domain Description: YodL Location: 23539-23836 bp Feature: domain Description: YodL Location: 2 3539-2 3836 bp Feature: domain Description: LPD18 Location: 23857-24109 bp Feature: domain Description: LPD18 Location: 2 3857-2 4109 bp Feature: domain Description: DUF4316 Location: 24229-24358 bp Feature: domain Description: DUF4316 Location: 2 42 2 9-2 4358 bp Feature: gene Location: 24577-26124 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 24928-25282 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2 492 8-2 52 82 bp Feature: gene Location: 26160-26975 bp Feature: gene Location: 27035-27700 bp Feature: domain Description: Sig-70_plancto1 Location: 27167-27323 bp Feature: domain Description: Sig-70_plancto1 Location: 2 7167-2 732 3 bp Feature: domain Description: RNA_pol_A_CTD Location: 27446-27623 bp Feature: domain Description: RNA_pol_A_CTD Location: 2 7446-2 762 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTRAP (pfam14203), YodL (pfam14191), LPD18 (pfam18832), DUF4316 (pfam14195), RVT-UG14, Sig-70_plancto1 (TIGR02984), RNA_pol_A_CTD (pfam03118)

Seq: CAAEYU010000300.1 (10766 bp)
Overview 1 RT 1: 3389-5769 bp Neighborhood of RT #1 [3389, 5801] YafQ_toxin RVT-GII RVT-GII Gp49 Feature: gene Location: 3389-3664 bp Feature: domain Description: YafQ_toxin Location: 3398-3662 bp Feature: domain Description: YafQ_toxin Location: 3 3 98-3 662 bp Feature: gene Location: 3715-3852 bp Feature: gene Location: 4207-4590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4408-4579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4408-4579 bp Feature: gene Location: 4517-5098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4586-4739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4586-473 9 bp Feature: gene Location: 5206-5391 bp Feature: gene Location: 5448-5801 bp Feature: domain Description: Gp49 Location: 5508-5769 bp Feature: domain Description: Gp49 Location: 5508-5769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafQ_toxin (pfam15738), RVT-GII, Gp49 (pfam05973)

Seq: CAAEYU010000120.1 (50427 bp)
Overview 1 RT 1: 1834-4508 bp Neighborhood of RT #1 [1834, 4534] RVT-DGRs Avd_like Feature: gene Location: 1834-2235 bp Feature: gene Location: 2225-2563 bp Feature: gene Location: 2765-3772 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2954-3569 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2954 -3569 bp Feature: gene Location: 3790-4086 bp Feature: gene Location: 4133-4534 bp Feature: domain Description: Avd_like Location: 4205-4508 bp Feature: domain Description: Avd_like Location: 4 205-4 508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: CAAEYU010000140.1 (3668 bp)
Overview 1 RT 1: 1182-3617 bp Neighborhood of RT #1 [1182, 3667] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Feature: gene Location: 1182-2165 bp Feature: domain Description: INT_RitB_C_like Location: 1518-2103 bp Feature: domain Description: INT_RitB_C_like Location: 15 18-2103 bp Feature: gene Location: 2158-3393 bp Feature: domain Description: Phage_int_SAM_1 Location: 2512-2734 bp Feature: domain Description: Phage_int_SAM_1 Location: 25 12-2734 bp Feature: domain Description: INT_RitA_C_like Location: 2827-3367 bp Feature: domain Description: INT_RitA_C_like Location: 2827-3367 bp Feature: gene Location: 3509-3667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3515-3617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 15 -3617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII