myRT

myRT report for GCA_900760365.1_SRS015782_64

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Seq: CAAEYT010000073.1 (6619 bp)
Overview 1 RT 1: 2-2799 bp Neighborhood of RT #1 [2, 2876] RVT-DGRs RVT-DGRs CADG CADG ChiC_BD ChiC_BD Feature: gene Location: 2-205 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-203 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-203 bp Feature: gene Location: 287-694 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 290-440 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 290-440 bp Feature: gene Location: 679-2418 bp Feature: domain Description: CADG Location: 1588-1789 bp Feature: domain Description: CADG Location: 1 588-1 789 bp Feature: domain Description: CADG Location: 1885-2104 bp Feature: domain Description: CADG Location: 1 885-21 04 bp Feature: gene Location: 2415-2876 bp Feature: domain Description: ChiC_BD Location: 2583-2700 bp Feature: domain Description: ChiC_BD Location: 2583-2700 bp Feature: domain Description: ChiC_BD Location: 2763-2799 bp Feature: domain Description: ChiC_BD Location: 2763-2799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CADG (smart00736), ChiC_BD (cd12215)

Seq: CAAEYT010000056.1 (75996 bp)
Overview 1 RT 1: 4846-11341 bp Neighborhood of RT #1 [4846, 11341] Prophage_tail Prophage_tail RVT-DGRs Feature: gene Location: 4846-7812 bp Feature: domain Description: Prophage_tail Location: 5200-5401 bp Feature: domain Description: Prophage_tail Location: 52 00-5401 bp Feature: domain Description: Prophage_tail Location: 6022-6268 bp Feature: domain Description: Prophage_tail Location: 602 2 -62 68 bp Feature: gene Location: 7822-8130 bp Feature: gene Location: 8204-9241 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8414-9020 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8414-902 0 bp Feature: gene Location: 9523-9870 bp Feature: gene Location: 9914-11341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prophage_tail (pfam06605), RVT-DGRs

Seq: CAAEYT010000080.1 (88502 bp)
Overview 1 RT 1: 53919-58922 bp Neighborhood of RT #1 [53919, 58922] ArdA RVT-GII HNHc HTH_XRE Feature: gene Location: 53919-54467 bp Feature: gene Location: 54480-55166 bp Feature: domain Description: ArdA Location: 54522-55029 bp Feature: domain Description: ArdA Location: 54522-55029 bp Feature: gene Location: 55980-57884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56295-57027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56295-57027 bp Feature: domain Description: HNHc Note: nucleases Location: 57606-57774 bp Feature: domain Description: HNHc Note: nucleases Location: 57606-57774 bp Feature: gene Location: 58010-58372 bp Feature: domain Description: HTH_XRE Location: 58037-58208 bp Feature: domain Description: HTH_XRE Location: 5803 7-58208 bp Feature: gene Location: 58593-58922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530)