myRT

myRT report for GCA_900760455.1_SRS016095_8

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Seq: CAAEZC010000119.1 (3733 bp)
Overview 1 RT 1: 1-3715 bp Neighborhood of RT #1 [1, 3732] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 1-906 bp Feature: domain Description: Bac_Flav_CT_G Location: 115-907 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 1 5-907 bp Feature: gene Location: 890-2566 bp Feature: domain Description: RVT_N Location: 947-1190 bp Feature: domain Description: RVT_N Location: 947-1 1 90 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235-1883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 235-1 883 bp Feature: domain Description: GIIM Note: maturase Location: 1934-2168 bp Feature: domain Description: GIIM Note: maturase Location: 1 934-21 68 bp Feature: gene Location: 3178-3732 bp Feature: domain Description: Bac_Flav_CT_G Location: 3184-3715 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 84-371 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000085.1 (13698 bp)
Overview 1 RT 1: 6000-13191 bp Neighborhood of RT #1 [6000, 13568] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII YkfC Feature: gene Location: 6000-6521 bp Feature: domain Description: DUF1896 Location: 6099-6519 bp Feature: domain Description: DUF1896 Location: 6099-6519 bp Feature: gene Location: 6511-11226 bp Feature: domain Description: N6_Mtase Location: 6823-7423 bp Feature: domain Description: N6_Mtase Location: 682 3-742 3 bp Feature: domain Description: COG4646 Location: 8842-10843 bp Feature: domain Description: COG4646 Location: 8842 -10843 bp Feature: gene Location: 11832-13568 bp Feature: domain Description: RVT_N Location: 11955-12198 bp Feature: domain Description: RVT_N Location: 11955-12 198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12243-12891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 43-12 891 bp Feature: domain Description: YkfC Location: 13101-13191 bp Feature: domain Description: YkfC Location: 13101-13191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000252.1 (10981 bp)
Overview 1 RT 1: 8350-10477 bp Neighborhood of RT #1 [8350, 10878] Bac_Flav_CT_G RVT_N RVT-GII GIIM Feature: gene Location: 8350-8595 bp Feature: domain Description: Bac_Flav_CT_G Location: 8353-8578 bp Feature: domain Description: Bac_Flav_CT_G Location: 83 53 -8578 bp Feature: gene Location: 8807-8953 bp Feature: gene Location: 9151-10878 bp Feature: domain Description: RVT_N Location: 9256-9499 bp Feature: domain Description: RVT_N Location: 9256-9499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9544-10192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9544-10192 bp Feature: domain Description: GIIM Note: maturase Location: 10243-10477 bp Feature: domain Description: GIIM Note: maturase Location: 10243 -10477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000057.1 (12955 bp)
Overview 1 RT 1: 13-6009 bp Neighborhood of RT #1 [13, 6011] RVT-GII Intron_maturas2 N6_Mtase COG4646 DUF1896 Feature: gene Location: 13-1815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-1099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-1099 bp Feature: domain Description: Intron_maturas2 Location: 1252-1477 bp Feature: domain Description: Intron_maturas2 Location: 1252-14 77 bp Feature: gene Location: 2345-5569 bp Feature: domain Description: N6_Mtase Location: 2657-3257 bp Feature: domain Description: N6_Mtase Location: 2657-3257 bp Feature: domain Description: COG4646 Location: 4658-5558 bp Feature: domain Description: COG4 64 6 Location: 4 658-5558 bp Feature: gene Location: 5559-6011 bp Feature: domain Description: DUF1896 Location: 5589-6009 bp Feature: domain Description: DUF1896 Location: 5589-6009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000171.1 (11119 bp)
Overview 1 RT 1: 5804-8624 bp Neighborhood of RT #1 [5804, 8624] RVT-DGRs Feature: gene Location: 5804-6037 bp Feature: gene Location: 6059-6316 bp Feature: gene Location: 6413-7714 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6626-7220 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6626-7220 bp Feature: gene Location: 7747-8196 bp Feature: gene Location: 8382-8624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000159.1 (4634 bp)
Overview 1 RT 1: 832-4624 bp Neighborhood of RT #1 [832, 4632] DUF3876 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 832-1212 bp Feature: domain Description: DUF3876 Location: 913-1177 bp Feature: domain Description: DUF3876 Location: 913-1177 bp Feature: gene Location: 1205-1387 bp Feature: gene Location: 1482-3305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1746-2568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1746 -256 8 bp Feature: domain Description: Intron_maturas2 Location: 2742-2985 bp Feature: domain Description: Intron_maturas2 Location: 2742-2985 bp Feature: domain Description: HNHc Note: nucleases Location: 3096-3267 bp Feature: domain Description: HNHc Note: nucleases Location: 3096 -326 7 bp Feature: gene Location: 3563-3751 bp Feature: gene Location: 3874-4632 bp Feature: domain Description: Bac_Flav_CT_G Location: 3880-4624 bp Feature: domain Description: Bac_Flav_CT_G Location: 3880-46 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000031.1 (7364 bp)
Overview 1 RT 1: 2149-7362 bp Neighborhood of RT #1 [2149, 7362] COG3378 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 2149-3354 bp Feature: domain Description: COG3378 Location: 2518-2827 bp Feature: domain Description: COG337 8 Location: 2518-2827 bp Feature: gene Location: 3612-3794 bp Feature: gene Location: 4342-6150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4606-5428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4606-5428 bp Feature: domain Description: Intron_maturas2 Location: 5497-5806 bp Feature: domain Description: Intron_maturas2 Location: 5497 -5806 bp Feature: gene Location: 6122-7033 bp Feature: domain Description: Toprim_2 Location: 6674-6953 bp Feature: domain Description: Toprim_2 Location: 667 4-6953 bp Feature: gene Location: 7210-7362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CAAEZC010000239.1 (71482 bp)
Overview 1 RT 1: 2-3577 bp Neighborhood of RT #1 [2, 3577] AAA-ATPase_like DUF1566 RVT-DGRs Avd_like Feature: gene Location: 2-790 bp Feature: domain Description: AAA-ATPase_like Location: 23-791 bp Feature: domain Description: AAA-ATPase_like Location: 23-791 bp Feature: gene Location: 1384-2562 bp Feature: domain Description: DUF1566 Location: 1522-1675 bp Feature: domain Description: DUF1566 Location: 1522-1675 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1909-2554 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1909-2554 bp Feature: gene Location: 2703-3080 bp Feature: domain Description: Avd_like Location: 2730-3033 bp Feature: domain Description: Avd_like Location: 2730-3033 bp Feature: gene Location: 3083-3577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT