myRT

myRT report for GCA_900760525.1_SRS017622_7

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Seq: CAAEZH010000119.1 (39258 bp)
Overview 1 RT 1: 29972-34722 bp Neighborhood of RT #1 [29972, 34722] COG3943 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 29972-30163 bp Feature: gene Location: 30280-30657 bp Feature: domain Description: COG3943 Location: 30310-30571 bp Feature: domain Description: COG3943 Location: 3031 0-30571 bp Feature: gene Location: 30884-32692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31148-31970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 48-31 970 bp Feature: domain Description: Intron_maturas2 Location: 32090-32345 bp Feature: domain Description: Intron_maturas2 Location: 32090-32345 bp Feature: gene Location: 33243-34409 bp Feature: domain Description: Arm-DNA-bind_5 Location: 33273-33528 bp Feature: domain Description: Arm-DNA-bind_5 Location: 33273-33528 bp Feature: domain Description: Phage_int_SAM_5 Location: 33567-33873 bp Feature: domain Description: Phage_int_SAM_5 Location: 33567-33873 bp Feature: domain Description: INTN1_C_like Location: 33924-34392 bp Feature: domain Description: INTN1 _C_like Location: 33924-34392 bp Feature: gene Location: 34567-34722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: CAAEZH010000125.1 (27652 bp)
Overview 1 RT 1: 454-5090 bp Neighborhood of RT #1 [454, 5110] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas6b_N Cas6b_C Feature: gene Location: 454-786 bp Feature: gene Location: 1246-1446 bp Feature: gene Location: 1751-4021 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1964-2573 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1964-2 573 bp Feature: domain Description: Cas1_I-II-III Location: 3026-3974 bp Feature: domain Description: Cas1_I-II-III Location: 302 6-3974 bp Feature: gene Location: 4015-4308 bp Feature: domain Description: Cas2_I_II_III Location: 4045-4255 bp Feature: domain Description: Cas2 _I_II_III Location: 4045-42 55 bp Feature: gene Location: 4436-5110 bp Feature: domain Description: Cas6b_N Location: 4454-4736 bp Feature: domain Description: Cas6b_N Location: 4454-4736 bp Feature: domain Description: Cas6b_C Location: 4769-5090 bp Feature: domain Description: Cas6b_C Location: 4769-5090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), Cas6b_N (pfam17955), Cas6b_C